RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 METTL13Q8N6R0 699 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 TMC2Q8TDI7 906 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 ATP6V0A1Q93050 837 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 MFSD14AQ96MC6 490 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 TEX13BQ9BXU2 312 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 TMEM117Q9H0C3 514 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 ISCUQ9H1K1 167 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 PCIF1Q9H4Z3 704 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 FAN1Q9Y2M0 1017 aa19.71■□□□□ 0.75
MECP2-205ENST00000453960 ANKRD62A6NC57 917 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 SPATA31C2B4DYI2 1134 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 GLI1P08151 1106 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 NOP2P46087 812 aaKnown RBP19.7■□□□□ 0.74
MECP2-205ENST00000453960 SMTNP53814 917 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 HMGCS2P54868 508 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 TNNC1P63316 161 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 SLC7A5Q01650 507 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 PLS1Q14651 629 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 ARHGEF19Q8IW93 802 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 MREGQ8N565 214 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 RDH13Q8NBN7 331 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 ZSWIM2Q8NEG5 633 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 CCDC43Q96MW1 224 aaKnown RBP19.7■□□□□ 0.74
MECP2-205ENST00000453960 AGPAT1Q99943 283 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 SH3GL2Q99962 352 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 AFG3L2Q9Y4W6 797 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 GJA3Q9Y6H8 435 aa19.7■□□□□ 0.74
MECP2-205ENST00000453960 KCNK3O14649 394 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 GTF2H1P32780 548 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 ICAM3P32942 547 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 TNNT3P45378 269 aaPredicted RBP19.69■□□□□ 0.74
MECP2-205ENST00000453960 MXI1P50539 228 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 ANGEL2Q5VTE6 544 aaKnown RBP19.69■□□□□ 0.74
MECP2-205ENST00000453960 ABHD15Q6UXT9 468 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 DNAAF5Q86Y56 855 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 FAM71AQ8IYT1 594 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 PARD3BQ8TEW8 1205 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.69■□□□□ 0.741e-7■■□□□ 11.9
MECP2-205ENST00000453960 ACAD9Q9H845 621 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 A1CFQ9NQ94 594 aaKnown RBP19.69■□□□□ 0.74
MECP2-205ENST00000453960 VPS18Q9P253 973 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 BCS1LQ9Y276 419 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 DIS3Q9Y2L1 958 aaKnown RBP19.69■□□□□ 0.74
MECP2-205ENST00000453960 IGSF9BQ9UPX0 1349 aa19.69■□□□□ 0.74
MECP2-205ENST00000453960 ANKRD63C9JTQ0 380 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 CCDC188H7C350 402 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 DGAT1O75907 488 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 PSAPP07602 524 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 CNGA1P29973 690 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 ABCD1P33897 745 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 MATR3P43243 847 aaKnown RBP eCLIP19.68■□□□□ 0.741e-6■■■■□ 24.8
MECP2-205ENST00000453960 GPC3P51654 580 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 DMP1Q13316 513 aaPredicted RBP19.68■□□□□ 0.74
MECP2-205ENST00000453960 FAM102BQ5T8I3 360 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 SLC39A4Q6P5W5 647 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 PEX26Q7Z412 305 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 MCPH1Q8NEM0 835 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 SLC35G2Q8TBE7 412 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 BSNDQ8WZ55 320 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 CCDC102AQ96A19 550 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 UBE2TQ9NPD8 197 aaPredicted RBP19.68■□□□□ 0.74
MECP2-205ENST00000453960 XPNPEP1Q9NQW7 623 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 SPDYE16A6NNV3 312 aaPredicted RBP19.68■□□□□ 0.74
MECP2-205ENST00000453960 PGRMC1O00264 195 aaKnown RBP19.68■□□□□ 0.74
MECP2-205ENST00000453960 MTA2O94776 668 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 ATG7O95352 703 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 TNFAIP3P21580 790 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 SCP2P22307 547 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 GCLMP48507 274 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 SNRNP35Q16560 246 aaKnown RBP19.68■□□□□ 0.74
MECP2-205ENST00000453960 ALS2CLQ60I27 953 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 CTNNBL1Q8WYA6 563 aaPredicted RBP19.68■□□□□ 0.74
MECP2-205ENST00000453960 SHC3Q92529 594 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 SH2D3AQ9BRG2 576 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 GOLPH3Q9H4A6 298 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 HOXC10Q9NYD6 342 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 GPRC5DQ9NZD1 345 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 GABBR1Q9UBS5 961 aa19.68■□□□□ 0.74
MECP2-205ENST00000453960 LRRC37A2A6NM11 1700 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 DDX3YO15523 660 aaKnown RBP19.67■□□□□ 0.74
MECP2-205ENST00000453960 BUB1BO60566 1050 aaPredicted RBP19.67■□□□□ 0.74
MECP2-205ENST00000453960 HEXIM1O94992 359 aaKnown RBP19.67■□□□□ 0.74
MECP2-205ENST00000453960 GZMAP12544 262 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 GARTP22102 1010 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 ARHGAP44Q17R89 818 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 SND1Q7KZF4 910 aaKnown RBP eCLIP19.67■□□□□ 0.74
MECP2-205ENST00000453960 PALB2Q86YC2 1186 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 RHOT2Q8IXI1 618 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.67■□□□□ 0.74
MECP2-205ENST00000453960 TRPM4Q8TD43 1214 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 KRT12Q99456 494 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 SPON1Q9HCB6 807 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 TMEM8AQ9HCN3 771 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 JPH1Q9HDC5 661 aaPredicted RBP19.67■□□□□ 0.74
MECP2-205ENST00000453960 KMT5AQ9NQR1 393 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 ARHGAP28Q9P2N2 729 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 SLC9A2Q9UBY0 812 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 NOCTQ9UK39 431 aaKnown RBP19.67■□□□□ 0.74
MECP2-205ENST00000453960 SBF1O95248 1867 aa19.67■□□□□ 0.74
MECP2-205ENST00000453960 OTOFQ9HC10 1997 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms