RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 NPTX2P47972 431 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 CPT1AP50416 773 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 FSCN1Q16658 493 aaKnown RBP21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 IER5Q5VY09 327 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 RETREG2Q8NC44 543 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 TMEM174Q8WUU8 243 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 SH2D3AQ9BRG2 576 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 MKNK1Q9BUB5 465 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 NOC4LQ9BVI4 516 aaKnown RBP21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 SEZ6LQ9BYH1 1024 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 STXBP5LQ9Y2K9 1186 aa21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.46■■□□□ 1.03
HIGD1A-204ENST00000452906 A0A1W2PQC6 194 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 ARVCFO00192 962 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 MAGEB2O15479 319 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 NR3C1P04150 777 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 FPGSQ05932 587 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 MXD4Q14582 209 aaPredicted RBP21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 C9orf50Q5SZB4 431 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 FRMD5Q7Z6J6 570 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 SLC9A9Q8IVB4 645 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 C12orf56Q8IXR9 622 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 CEP89Q96ST8 783 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 GPRC5CQ9NQ84 441 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 TBX21Q9UL17 535 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 ZMYM2Q9UBW7 1377 aa21.45■■□□□ 1.02
HIGD1A-204ENST00000452906 SLC16A4O15374 487 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 TLR3O15455 904 aaKnown RBP21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 MARK3P27448 753 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 IRX5P78411 483 aaPredicted RBP21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 ZC2HC1CQ53FD0 456 aaPredicted RBP21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 CCDC186Q7Z3E2 898 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 TRIM50Q86XT4 487 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 TMEM161BQ8NDZ6 487 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 VPS16Q9H269 839 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 INTS13Q9NVM9 706 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 FRMD4BQ9Y2L6 1034 aa21.44■■□□□ 1.02
HIGD1A-204ENST00000452906 KAT6AQ92794 2004 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 A6NJR5 290 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 PES1O00541 588 aaKnown RBP21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 TIMP1P01033 207 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 SFPQP23246 707 aaKnown RBP eCLIP21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 HOXD13P35453 343 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 ARL2P36404 184 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 SMAD3P84022 425 aaKnown RBP21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 UBXN1Q04323 297 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 TFDP1Q14186 410 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 PPFIBP1Q86W92 1011 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 MAP4K3Q8IVH8 894 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 DEPTORQ8TB45 409 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 PSPC1Q8WXF1 523 aaKnown RBP21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 POLD4Q9HCU8 107 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 AGPAT3Q9NRZ7 376 aa21.43■■□□□ 1.02
HIGD1A-204ENST00000452906 IGKV6-21A0A0C4DH24 114 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 DENND3A2RUS2 1198 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 H3BRB1 525 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 ASAP2O43150 1006 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 TGFB1I1O43294 461 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 KPNA6O60684 536 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 PSMC2P35998 433 aaKnown RBP21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 EFNA5P52803 228 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 BEX3Q00994 111 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 STRN3Q13033 797 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 VWA3BQ502W6 1294 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 ZNF697Q5TEC3 545 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 ZSCAN30Q86W11 494 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 FAM126BQ8IXS8 530 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 NUP58Q9BVL2 599 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 KATNAL1Q9BW62 490 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 C2orf40Q9H1Z8 148 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 TUT1Q9H6E5 874 aaKnown RBP21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 ARHGAP28Q9P2N2 729 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 ARMCX3Q9UH62 379 aaPredicted RBP21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 TBX20Q9UMR3 447 aa21.42■■□□□ 1.02
HIGD1A-204ENST00000452906 KIAA0391O15091 583 aaKnown RBP21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 PTGS1P23219 599 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 MSNP26038 577 aaKnown RBP21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 TMOD1P28289 359 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 PBX1P40424 430 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 MFSD5Q6N075 450 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 CXCL17Q6UXB2 119 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 SLC43A3Q8NBI5 491 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 CCDC112Q8NEF3 446 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 RNPC3Q96LT9 517 aaKnown RBP21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 C16orf70Q9BSU1 422 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 NDST4Q9H3R1 872 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 TMEM134Q9H6X4 195 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 ZKSCAN5Q9Y2L8 839 aa21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.41■■□□□ 1.02
HIGD1A-204ENST00000452906 RRN3P2A6NIE6 340 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 MAPK13O15264 365 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 TMEM63BQ5T3F8 832 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 TRIM59Q8IWR1 403 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 ZBTB8OSQ8IWT0 167 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 TMEM143Q96AN5 459 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 ERGIC2Q96RQ1 377 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 DMAC2Q9NW81 257 aa21.4■■□□□ 1.02
HIGD1A-204ENST00000452906 SCN10AQ9Y5Y9 1956 aa21.39■■□□□ 1.02
HIGD1A-204ENST00000452906 LRRIQ4A6NIV6 560 aa21.39■■□□□ 1.01
HIGD1A-204ENST00000452906 ZBTB42B2RXF5 422 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms