RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TMCO1Q9UM00 188 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 MYH7BA7E2Y1 1941 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 FRMPD2Q68DX3 1309 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 CCDC188H7C350 402 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 LCA5LO95447 670 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 FAM200BP0CF97 657 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 PDXDC1Q6P996 788 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 RHBDL2Q9NX52 303 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 MTMR7Q9Y216 660 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 KLHDC7AQ5VTJ3 777 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 UCMAQ8WVF2 138 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 BUB1O43683 1085 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 INHBCP55103 352 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 SHROOM1Q2M3G4 852 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 CENPPQ6IPU0 288 aa14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 LARP4BQ92615 738 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 PRMT1Q99873 361 aaKnown RBP14.48□□□□□ -0.09
SYNGAP1-204ENST00000449372 ECHS1P30084 290 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 DEUP1Q05D60 604 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 AOC3Q16853 763 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 MUM1Q2TAK8 710 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 IRGCQ6NXR0 463 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 SESTD1Q86VW0 696 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 REXO1Q8N1G1 1221 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 DUSP9Q99956 384 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 TRIM7Q9C029 511 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 PDGFDQ9GZP0 370 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 MTFR1LQ9H019 292 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 DHX36Q9H2U1 1008 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 INTS9Q9NV88 658 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 KLRC4O43908 158 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 SNX3O60493 162 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 KRT18P05783 430 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 KLK7P49862 253 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 PLS1Q14651 629 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 CALCRLQ16602 461 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 STK32AQ8WU08 396 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 ATXN2LQ8WWM7 1075 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 GBP5Q96PP8 586 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 PNMA3Q9UL41 463 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 COL4A3BPQ9Y5P4 624 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 KCNA3P22001 575 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 EN1Q05925 392 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 KLHL30Q0D2K2 578 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 RASIP1Q5U651 963 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 CEP128Q6ZU80 1094 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 ASRGL1Q7L266 308 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 HOOK3Q86VS8 718 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 ADGRF4Q8IZF3 695 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 TLCD1Q96CP7 247 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 RAB3IPQ96QF0 476 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 MTMR9Q96QG7 549 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 PLIN2Q99541 437 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 SALL4Q9UJQ4 1053 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 PP2D1A8MPX8 630 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 TRAF5O00463 557 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 IFNAR2P48551 515 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 SERPINB4P48594 390 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 CACNB3P54284 484 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 RNF168Q8IYW5 571 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 PROCA1Q8NCQ7 364 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 CCDC17Q96LX7 622 aa14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 USP15Q9Y4E8 981 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-204ENST00000449372 TPBGLP0DKB5 382 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 FLT3P36888 993 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 EIF3BP55884 814 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 RASSF7Q02833 373 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 DDX23Q9BUQ8 820 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 LRRC4CQ9HCJ2 640 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 BRCA1P38398 1863 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 PAX3P23760 479 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 PDE6CP51160 858 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 EIF6P56537 245 aaKnown RBP14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 BPIFB4P59827 614 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 TTBK2Q6IQ55 1244 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 PPP1R18Q6NYC8 613 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 TMEM260Q9NX78 707 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 CTTNBP2NLQ9P2B4 639 aa14.46□□□□□ -0.09
SYNGAP1-204ENST00000449372 CETN3O15182 167 aa14.46□□□□□ -0.1
SYNGAP1-204ENST00000449372 SUN1O94901 812 aa14.46□□□□□ -0.1
SYNGAP1-204ENST00000449372 EIF4BP23588 611 aaKnown RBP14.46□□□□□ -0.1
SYNGAP1-204ENST00000449372 PTDSS1P48651 473 aaKnown RBP14.46□□□□□ -0.1
SYNGAP1-204ENST00000449372 PIGOQ8TEQ8 1089 aa14.46□□□□□ -0.1
SYNGAP1-204ENST00000449372 NEUROG2Q9H2A3 272 aa14.46□□□□□ -0.1
SYNGAP1-204ENST00000449372 PNMA6FA0A0J9YX94 578 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 LRRC53A6NM62 1247 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 HLA-DOAP06340 250 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 MCL1Q07820 350 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 CCNJLQ8IV13 435 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 ARL10Q8N8L6 244 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 NUDCD1Q96RS6 583 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 TSPAN18Q96SJ8 248 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 IWS1Q96ST2 819 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 FAM114A2Q9NRY5 505 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 PI4KBQ9UBF8 816 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 RASAL2Q9UJF2 1139 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 JAG1P78504 1218 aa14.45□□□□□ -0.1
SYNGAP1-204ENST00000449372 ZNF365Q70YC5 407 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms