RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SRGAP2CP0DJJ0 459 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 PHKA2P46019 1235 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 SARSP49591 514 aaKnown RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 CEBPZQ03701 1054 aaKnown RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 MXD4Q14582 209 aaPredicted RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 ECM1Q16610 540 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 NAALADL2Q58DX5 795 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 FOXD4L5Q5VV16 416 aaPredicted RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 PADI6Q6TGC4 694 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 FAM43BQ6ZT52 329 aaPredicted RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 CATSPER4Q7RTX7 472 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 CMTR2Q8IYT2 770 aaKnown RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 MCPH1Q8NEM0 835 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 FOXD4L4Q8WXT5 416 aaPredicted RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 EDAQ92838 391 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 MFSD14AQ96MC6 490 aa16.16■□□□□ 0.18
USP39-206ENST00000448971 PIN4Q9Y237 131 aaKnown RBP16.16■□□□□ 0.18
USP39-206ENST00000448971 ASAP2O43150 1006 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 FAM102BQ5T8I3 360 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 SLC24A5Q71RS6 500 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 BMP8AQ7Z5Y6 402 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 ADGRD2Q7Z7M1 963 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 KLHL23Q8NBE8 558 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 ASAP3Q8TDY4 903 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 AK8Q96MA6 479 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 NT5C3AQ9H0P0 336 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 GPRC5CQ9NQ84 441 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 CLIC4Q9Y696 253 aa16.15■□□□□ 0.18
USP39-206ENST00000448971 E9PMD0 336 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 ERLIN2O94905 339 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 CSPG5O95196 566 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 COASYQ13057 564 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 CAPSQ13938 189 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 PAN2Q504Q3 1202 aaKnown RBP16.14■□□□□ 0.17
USP39-206ENST00000448971 SRGAP1Q7Z6B7 1085 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 CABP7Q86V35 215 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 EFHBQ8N7U6 833 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 SMRP1Q8NCR6 262 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 MMTAG2Q9BU76 263 aaKnown RBP16.14■□□□□ 0.17
USP39-206ENST00000448971 IFT122Q9HBG6 1241 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 DNM3Q9UQ16 869 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 PCDHB7Q9Y5E2 793 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 KIAA1671Q9BY89 1806 aa16.14■□□□□ 0.17
USP39-206ENST00000448971 LRRIQ4A6NIV6 560 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 LOC730098B7Z3J9 87 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 C9IYK1 514 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 INO80B-WBP1J3KQ70 363 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 SSBP05455 408 aaKnown RBP eCLIP16.13■□□□□ 0.17
USP39-206ENST00000448971 PDIA4P13667 645 aaKnown RBP16.13■□□□□ 0.17
USP39-206ENST00000448971 GLRA2P23416 452 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 MARCKSP29966 332 aaPredicted RBP16.13■□□□□ 0.17
USP39-206ENST00000448971 ARL2P36404 184 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 LONP1P36776 959 aaKnown RBP16.13■□□□□ 0.17
USP39-206ENST00000448971 UBA7P41226 1012 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 DSC3Q14574 896 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 TWF2Q6IBS0 349 aaKnown RBP16.13■□□□□ 0.17
USP39-206ENST00000448971 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 CALML4Q96GE6 196 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 PLIN2Q99541 437 aa16.13■□□□□ 0.17
USP39-206ENST00000448971 MYH15Q9Y2K3 1946 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 GLP2RO95838 553 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 F13A1P00488 732 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 ZSCAN22P10073 491 aaPredicted RBP16.12■□□□□ 0.17
USP39-206ENST00000448971 CYP11B2P19099 503 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 NDUFV1P49821 464 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 GATMP50440 423 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 GRIN1Q05586 938 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 BECN1Q14457 450 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 CBX2Q14781 532 aaPredicted RBP16.12■□□□□ 0.17
USP39-206ENST00000448971 STK38Q15208 465 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 PTPAQ15257 358 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 IER5LQ5T953 404 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 TRIM67Q6ZTA4 783 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 ZBTB8OSQ8IWT0 167 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 POF1BQ8WVV4 589 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 FAM212AQ96EL1 285 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 ZNF396Q96N95 335 aaPredicted RBP16.12■□□□□ 0.17
USP39-206ENST00000448971 MINDY3Q9H8M7 445 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 AGPAT5Q9NUQ2 364 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 TMEM161AQ9NX61 479 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 CFAP54Q96N23 3096 aa16.12■□□□□ 0.17
USP39-206ENST00000448971 TXLNAP40222 546 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 NRIP1P48552 1158 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 PTENP60484 403 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 FOXD4L6Q3SYB3 417 aaPredicted RBP16.11■□□□□ 0.17
USP39-206ENST00000448971 HYIQ5T013 277 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 FOXD4L3Q6VB84 417 aaPredicted RBP16.11■□□□□ 0.17
USP39-206ENST00000448971 KCNK18Q7Z418 384 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 RBM23Q86U06 439 aaKnown RBP16.11■□□□□ 0.17
USP39-206ENST00000448971 ABI1Q8IZP0 508 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 PNMA5Q96PV4 448 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 PHOX2BQ99453 314 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 ELAC1Q9H777 363 aaKnown RBP16.11■□□□□ 0.17
USP39-206ENST00000448971 CHST12Q9NRB3 414 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 PCDHGC5Q9Y5F6 944 aa16.11■□□□□ 0.17
USP39-206ENST00000448971 PLXNA4Q9HCM2 1894 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms