RNA–Protein interactions for RNA: ENST00000445537.6

PTPRO-204, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 4,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-204ENST00000445537 TMEM117Q9H0C3 514 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 MAPK8IP1Q9UQF2 711 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 IGSF9BQ9UPX0 1349 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 DDIT3P35638 169 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 NOP2P46087 812 aaKnown RBP5.69□□□□□ -1.5
PTPRO-204ENST00000445537 ZNF200P98182 395 aaPredicted RBP5.69□□□□□ -1.5
PTPRO-204ENST00000445537 GIT2Q14161 759 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 PPM1LQ5SGD2 360 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 CCDC181Q5TID7 509 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 LLGL2Q6P1M3 1020 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 TTC30AQ86WT1 665 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 SUGP1Q8IWZ8 645 aaKnown RBP5.69□□□□□ -1.5
PTPRO-204ENST00000445537 PHOSPHO2Q8TCD6 241 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 RSPH1Q8WYR4 309 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 POLR3CQ9BUI4 534 aaPredicted RBP5.69□□□□□ -1.5
PTPRO-204ENST00000445537 PRDM12Q9H4Q4 367 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 PCIF1Q9H4Z3 704 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 POLD4Q9HCU8 107 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 COL20A1Q9P218 1284 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 AGO2Q9UKV8 859 aaKnown RBP5.69□□□□□ -1.5
PTPRO-204ENST00000445537 ODF2LQ9ULJ1 636 aa5.69□□□□□ -1.5
PTPRO-204ENST00000445537 TIAM2Q8IVF5 1701 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 DNAJC25-GNG10A0A024R161 153 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 FGFR4P22455 802 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 CETN2P41208 172 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 PIK3CAP42336 1068 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 MRPS9P82933 396 aaKnown RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SPAG1Q07617 926 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 NOLC1Q14978 699 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SLC39A14Q15043 492 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 ZNF280DQ6N043 979 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 TAPT1Q6NXT6 567 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 CDR2LQ86X02 465 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 HELQQ8TDG4 1101 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 RIN2Q8WYP3 895 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 JAKMIP2Q96AA8 810 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 PRIMPOLQ96LW4 560 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 USP28Q96RU2 1077 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 BLZF1Q9H2G9 400 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 ST7Q9NRC1 585 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 UBQLN1Q9UMX0 589 aaKnown RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 MAGED2Q9UNF1 606 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 COLQQ9Y215 455 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 TUBGCP6Q96RT7 1819 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 KIAA0391O15091 583 aaKnown RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 CA3P07451 260 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 CLTAP09496 248 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 NFKBIBQ15653 356 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 MGAT5BQ3V5L5 792 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 ZNF667Q5HYK9 610 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 FAM43BQ6ZT52 329 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 HERC6Q8IVU3 1022 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SLC5A5Q92911 643 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 POP1Q99575 1024 aaKnown RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 APOL5Q9BWW9 433 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SLC39A2Q9NP94 309 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 PDLIM7Q9NR12 457 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 RAB23Q9ULC3 237 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SCN9AQ15858 1988 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 N4BP1O75113 896 aaKnown RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 KCNA5P22460 613 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SP100P23497 879 aaPredicted RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 PCSK1P29120 753 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 UBE2HP62256 183 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 TMEM132DQ14C87 1099 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SHHQ15465 462 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 FAM171A1Q5VUB5 890 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 CCDC149Q6ZUS6 474 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 FMNL3Q8IVF7 1028 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 FAM213AQ9BRX8 229 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 PCDHB2Q9Y5E7 798 aa5.68□□□□□ -1.5
PTPRO-204ENST00000445537 SF3B1O75533 1304 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 DDX60Q8IY21 1712 aaKnown RBP5.68□□□□□ -1.5
PTPRO-204ENST00000445537 AKAP11Q9UKA4 1901 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 COL4A5P29400 1685 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 MYADML2A6NDP7 307 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 SLC26A4O43511 780 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 SLC37A4O43826 429 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 ARIH2O95376 493 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 PLS3P13797 630 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 KCNA2P16389 499 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 RDXP35241 583 aaKnown RBP5.67□□□□□ -1.5
PTPRO-204ENST00000445537 NR1H3Q13133 447 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 SNX17Q15036 470 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 PTPAQ15257 358 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 DUOXA2Q1HG44 320 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 CTXN3Q4LDR2 81 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 SPATA2LQ8IUW3 424 aaPredicted RBP5.67□□□□□ -1.5
PTPRO-204ENST00000445537 CD302Q8IX05 232 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 CSGALNACT2Q8N6G5 542 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 RNF139Q8WU17 664 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 DDX12PQ92771 950 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 RPGRIP1Q96KN7 1286 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 CLIC6Q96NY7 704 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 GAD1Q99259 594 aa5.67□□□□□ -1.5
PTPRO-204ENST00000445537 SEPT5Q99719 369 aaPredicted RBP5.67□□□□□ -1.5
PTPRO-204ENST00000445537 NOC4LQ9BVI4 516 aaKnown RBP5.67□□□□□ -1.5
PTPRO-204ENST00000445537 TARS2Q9BW92 718 aaKnown RBP5.67□□□□□ -1.5
PTPRO-204ENST00000445537 LRRC4Q9HBW1 653 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms