RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SALL3Q9BXA9 1300 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 FTHL17Q9BXU8 183 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 DNAJB12Q9NXW2 375 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 NOVA2Q9UNW9 492 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 SQORQ9Y6N5 450 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 DMXL1Q9Y485 3027 aa9.69□□□□□ -0.86
NIF3L1-208ENST00000436412 OTOGLQ3ZCN5 2332 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 FIBPO43427 364 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 STAG3L1P0CL83 205 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 NFKB1P19838 968 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 RFX1P22670 979 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 NRIP1P48552 1158 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 UBE3AQ05086 875 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 FBXO47Q5MNV8 452 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 TSHZ1Q6ZSZ6 1077 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 CYFIP1Q7L576 1253 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 ERMP1Q7Z2K6 904 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 ADGRD2Q7Z7M1 963 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 ZNF589Q86UQ0 364 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 KLHL23Q8NBE8 558 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 GIMAP8Q8ND71 665 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 SUSD6Q92537 303 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 CDCA3Q99618 268 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 TLE6Q9H808 572 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 ZFATQ9P243 1243 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 MRPL42Q9Y6G3 142 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 CHD8Q9HCK8 2581 aa9.68□□□□□ -0.86
NIF3L1-208ENST00000436412 FRMPD4Q14CM0 1322 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 MBLAC1A4D2B0 266 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 KLRF2D3W0D1 207 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 RBAK-RBAKDNI3L0D1 243 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 SRGAP2BP0DMP2 458 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 DNAJB1P25685 340 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 PDE1AP54750 535 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 VCPP55072 806 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 MGAT3Q09327 533 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 TBC1D8BQ0IIM8 1120 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 NMIQ13287 307 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 PTPN21Q16825 1174 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 C11orf91Q3C1V1 193 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 PDE12Q6L8Q7 609 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 XRRA1Q6P2D8 792 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 ATP8B4Q8TF62 1192 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 POF1BQ8WVV4 589 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 RPGRIP1Q96KN7 1286 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 UBAC1Q9BSL1 405 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 KRT23Q9C075 422 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 BCAS3Q9H6U6 928 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 FAM86C1Q9NVL1 165 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 ZSWIM5Q9P217 1185 aa9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 BARX2Q9UMQ3 279 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-208ENST00000436412 PPP1R11O60927 126 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 LILRB5O75023 590 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 MICAL2O94851 1124 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 GLP2RO95838 553 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 NBL1P41271 181 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 MRPS6P82932 125 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 MRPS9P82933 396 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 PPFIA1Q13136 1202 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 DOC2BQ14184 412 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 OCLNQ16625 522 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 PRRT3Q5FWE3 981 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 IFIT1BQ5T764 474 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 UTP14CQ5TAP6 766 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 TMEM184AQ6ZMB5 413 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 RUFY4Q6ZNE9 571 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 RBM23Q86U06 439 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 UBALD2Q8IYN6 164 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 MICAL1Q8TDZ2 1067 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 TNPO1Q92973 898 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 RIPOR3Q96MK2 946 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 NEK1Q96PY6 1258 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 CNNM2Q9H8M5 875 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 TUBE1Q9UJT0 475 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 PCDHB12Q9Y5F1 795 aa9.66□□□□□ -0.86
NIF3L1-208ENST00000436412 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 PNMA6FA0A0J9YX94 578 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 RRN3P2A6NIE6 340 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 B4E1Z4 1266 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 H0Y858 1186 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 CSPG5O95196 566 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 MAP3K6O95382 1288 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 SCG2P13521 617 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 HOXB8P17481 243 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 GATA4P43694 442 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 ARSDP51689 593 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 GRIK4Q16099 956 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 RTN4RL1Q86UN2 441 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 NLRX1Q86UT6 975 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 DNAJB3Q8WWF6 145 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 IFT43Q96FT9 208 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 CDHR1Q96JP9 859 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 RIOX1Q9H6W3 641 aa9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 AGO3Q9H9G7 860 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-208ENST00000436412 TLR9Q9NR96 1032 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms