RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 DYDC2Q96IM9 177 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 ZSWIM4Q9H7M6 989 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 MINDY3Q9H8M7 445 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 RSAD1Q9HA92 442 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 KANSL3Q9P2N6 904 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 B4GALT3O60512 393 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 DDHD2O94830 711 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 ALDH2P05091 517 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 HOXA11P31270 313 aaPredicted RBP16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 CTTNQ14247 550 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 EMC2Q15006 297 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 XKR9Q5GH70 373 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 EARS2Q5JPH6 523 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 UBXN11Q5T124 520 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 PPFIBP1Q86W92 1011 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 SLFN12Q8IYM2 578 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 RNF149Q8NC42 400 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 WASF1Q92558 559 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 FAM193BQ96PV7 902 aaPredicted RBP16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 SORCS3Q9UPU3 1222 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 CNTNAP2Q9UHC6 1331 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 WDR81Q562E7 1941 aa16.9■□□□□ 0.3
CSNK1E-208ENST00000431611 PIEZO1Q92508 2521 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 ZBTB39O15060 712 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 CTDNEP1O95476 244 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 AVPR2P30518 371 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 AFF1P51825 1210 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 VCPP55072 806 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 CYP4A11Q02928 519 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 MTMR3Q13615 1198 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 PTPN14Q15678 1187 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 KIAA1841Q6NSI8 718 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 FERMT3Q86UX7 667 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 CABP7Q86V35 215 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 TPH2Q8IWU9 490 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 UBALD2Q8IYN6 164 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 TDRD5Q8NAT2 981 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 CNNM3Q8NE01 707 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 MTRQ99707 1265 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 VN1R3Q9BXE9 311 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 EMILIN2Q9BXX0 1053 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 DBR1Q9UK59 544 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 ZNF318Q5VUA4 2279 aa16.89■□□□□ 0.29
CSNK1E-208ENST00000431611 FAM205CA6NFA0 338 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 ERLIN2O94905 339 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 SLITRK3O94933 977 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 POMCP01189 267 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 KRT2P35908 639 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 TCF15Q12870 199 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 NR5A1Q13285 461 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 TMC5Q6UXY8 1006 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 KLHL5Q96PQ7 755 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 PHOX2BQ99453 314 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 BRMS1Q9HCU9 246 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 UBN1Q9NPG3 1134 aa16.88■□□□□ 0.29
CSNK1E-208ENST00000431611 TRIOO75962 3097 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 NRP1O14786 923 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 BRD1O95696 1058 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 SSBP05455 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 ITGA4P13612 1032 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 KLRC2P26717 231 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 AK2P54819 239 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 NCBP1Q09161 790 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 MXD4Q14582 209 aaPredicted RBP16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 PCBP1Q15365 356 aaKnown RBP eCLIP16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 ZDHHC14Q8IZN3 488 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 EIF2AK1Q9BQI3 630 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 MRPL17Q9NRX2 175 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 USTQ9Y2C2 406 aa16.87■□□□□ 0.29
CSNK1E-208ENST00000431611 TSPAN1O60635 241 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 PDGFBP01127 241 aaPredicted RBP16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 CNPP09543 421 aaKnown RBP16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 FDPSP14324 419 aaKnown RBP16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 AXLP30530 894 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 ANAPC15P60006 121 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 PTENP60484 403 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 TFDP1Q14186 410 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 GPR149Q86SP6 731 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 SMG8Q8ND04 991 aaKnown RBP16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 CCDC51Q96ER9 411 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 SFXN1Q9H9B4 322 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 XPNPEP1Q9NQW7 623 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 LIMD1Q9UGP4 676 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 IPPQ9Y573 584 aa16.86■□□□□ 0.29
CSNK1E-208ENST00000431611 INO80B-WBP1J3KQ70 363 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms