RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 SOBPA7XYQ1 873 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 C1QTNF9BB2RNN3 333 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 KLRF2D3W0D1 207 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 TBC1D4O60343 1298 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 F13A1P00488 732 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 C1QTNF9P0C862 333 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 CTSAP10619 480 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
ATG4B-212ENST00000430617 CLCN4P51793 760 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 RESTQ13127 1097 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 NONOQ15233 471 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■■□□ 14.8
ATG4B-212ENST00000430617 MTHFD1LQ6UB35 978 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 C15orf39Q6ZRI6 1047 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 CLEC17AQ6ZS10 378 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 HOMER1Q86YM7 354 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 NME8Q8N427 588 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 TMEM87AQ8NBN3 555 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 TNPO1Q92973 898 aaKnown RBP11.35□□□□□ -0.59
ATG4B-212ENST00000430617 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
ATG4B-212ENST00000430617 VN1R3Q9BXE9 311 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 RIOX1Q9H6W3 641 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 GMEB2Q9UKD1 530 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 EML5Q05BV3 1969 aa11.35□□□□□ -0.59
ATG4B-212ENST00000430617 KANSL1LA0AUZ9 987 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 GPR182O15218 404 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 ZIC2O95409 532 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-212ENST00000430617 MYBP10242 640 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 FOSBP53539 338 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
ATG4B-212ENST00000430617 HTR4Q13639 388 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-212ENST00000430617 PCNX4Q63HM2 1172 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 CCDC82Q8N4S0 544 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-212ENST00000430617 FBXO18Q8NFZ0 1043 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-212ENST00000430617 WASF1Q92558 559 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 C8orf76Q96K31 380 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 OSMRQ99650 979 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 DDX23Q9BUQ8 820 aaKnown RBP11.34□□□□□ -0.59
ATG4B-212ENST00000430617 BCO2Q9BYV7 579 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 WDR6Q9NNW5 1121 aaKnown RBP11.34□□□□□ -0.59
ATG4B-212ENST00000430617 GJB4Q9NTQ9 266 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 TICRRQ7Z2Z1 1910 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 CLUHO75153 1309 aa11.34□□□□□ -0.59
ATG4B-212ENST00000430617 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 ANHXE9PGG2 379 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 HOXA2O43364 376 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 CNPP09543 421 aaKnown RBP11.33□□□□□ -0.6
ATG4B-212ENST00000430617 CD72P21854 359 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 KLRC1P26715 233 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 ALDH7A1P49419 539 aaKnown RBP11.33□□□□□ -0.6
ATG4B-212ENST00000430617 GPC5P78333 572 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
ATG4B-212ENST00000430617 KIZQ2M2Z5 673 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 PRR23CQ6ZRP0 262 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 DDX53Q86TM3 631 aaKnown RBP11.33□□□□□ -0.6
ATG4B-212ENST00000430617 ECHDC2Q86YB7 292 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 RNF169Q8NCN4 708 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 HELQQ8TDG4 1101 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 NXPE3Q969Y0 559 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 KLHL5Q96PQ7 755 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 PIGSQ96S52 555 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 NUMBLQ9Y6R0 609 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-212ENST00000430617 LAMA5O15230 3695 aa11.33□□□□□ -0.6
ATG4B-212ENST00000430617 COL4A2P08572 1712 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 CCDC195A0A1B0GUA6 201 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 FAM170BA6NMN3 283 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 LAMP2P13473 410 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 ITGB5P18084 799 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
ATG4B-212ENST00000430617 KLRC2P26717 231 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 POLGP54098 1239 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-212ENST00000430617 GUCY1B3Q02153 619 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 GIT2Q14161 759 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 UBXN2BQ14CS0 331 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 NPY5RQ15761 445 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 FAM177A1Q8N128 213 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-212ENST00000430617 IGSF21Q96ID5 467 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 SEMA4GQ9NTN9 838 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 VPS54Q9P1Q0 977 aa11.32□□□□□ -0.6
ATG4B-212ENST00000430617 BPTFQ12830 3046 aa11.31□□□□□ -0.6
ATG4B-212ENST00000430617 H3BQV1 296 aa11.31□□□□□ -0.6
ATG4B-212ENST00000430617 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
ATG4B-212ENST00000430617 TM4SF5O14894 197 aa11.31□□□□□ -0.6
ATG4B-212ENST00000430617 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.6
ATG4B-212ENST00000430617 RFPL2O75678 378 aa11.31□□□□□ -0.6
ATG4B-212ENST00000430617 SSBP05455 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms