RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TMEM260Q9NX78 707 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 CCDC39Q9UFE4 941 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 USP25Q9UHP3 1055 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 NLRC5Q86WI3 1866 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 ESYT2A0FGR8 921 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 DCDC2BA2VCK2 349 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 SMCO2A6NFE2 343 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 SPDYE3A6NKU9 549 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 KINO60870 393 aaKnown RBP9.7□□□□□ -0.86
HDAC1-202ENST00000428704 CUTAO60888 179 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 PPFIA4O75335 1185 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 DGKIO75912 1065 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 LGALS2P05162 132 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 ARP10275 920 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 NPR3P17342 541 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 RFX1P22670 979 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 HOXC8P31273 242 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 GCGRP47871 477 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 CAMK4Q16566 473 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 KMT5BQ4FZB7 885 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 METTL7BQ6UX53 244 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 CYFIP1Q7L576 1253 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 TEX2Q8IWB9 1127 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 FSIP1Q8NA03 581 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 TDRD5Q8NAT2 981 aaKnown RBP9.7□□□□□ -0.86
HDAC1-202ENST00000428704 CRYGNQ8WXF5 182 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 GPR20Q99678 358 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 SENP7Q9BQF6 1050 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 ANO3Q9BYT9 981 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 GOLPH3LQ9H4A5 285 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 NCDNQ9UBB6 729 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 FBXL21Q9UKT6 434 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 HPSEQ9Y251 543 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 ATG2AQ2TAZ0 1938 aa9.7□□□□□ -0.86
HDAC1-202ENST00000428704 TREHO43280 583 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 ZNF500O60304 480 aaPredicted RBP9.69□□□□□ -0.86
HDAC1-202ENST00000428704 TPM3P06753 285 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 SREBF1P36956 1147 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 AKAP17AQ02040 695 aaKnown RBP9.69□□□□□ -0.86
HDAC1-202ENST00000428704 NEDD9Q14511 834 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 PAN2Q504Q3 1202 aaKnown RBP9.69□□□□□ -0.86
HDAC1-202ENST00000428704 CES5AQ6NT32 575 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 LLGL2Q6P1M3 1020 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 SYCE2Q6PIF2 218 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 NLRX1Q86UT6 975 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 DIS3L2Q8IYB7 885 aaKnown RBP9.69□□□□□ -0.86
HDAC1-202ENST00000428704 CMTR2Q8IYT2 770 aaKnown RBP9.69□□□□□ -0.86
HDAC1-202ENST00000428704 GPR161Q8N6U8 529 aaKnown RBP9.69□□□□□ -0.86
HDAC1-202ENST00000428704 NECTIN4Q96NY8 510 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 RTKNQ9BST9 563 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 PHF20Q9BVI0 1012 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 ZMYND12Q9H0C1 365 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 POMKQ9H5K3 350 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 MLXIPQ9HAP2 919 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 JADE2Q9NQC1 790 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 LIMD1Q9UGP4 676 aa9.69□□□□□ -0.86
HDAC1-202ENST00000428704 FASNP49327 2511 aaKnown RBP9.68□□□□□ -0.86
HDAC1-202ENST00000428704 OTOGLQ3ZCN5 2332 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 PRR5-ARHGAP8B1AHC4 643 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 BTBD18B2RXH4 712 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 ENPP3O14638 875 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 ZNF202O95125 648 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 ADCY5O95622 1261 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 BMP15O95972 392 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 FOSP01100 380 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-202ENST00000428704 GHRP10912 638 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 HOXB8P17481 243 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-202ENST00000428704 TOB1P50616 345 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-202ENST00000428704 ARHGAP8P85298 464 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 SP4Q02446 784 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 LMNB2Q03252 620 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 UBE3AQ05086 875 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 MTMR1Q13613 665 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 GNL2Q13823 731 aaKnown RBP9.68□□□□□ -0.86
HDAC1-202ENST00000428704 STX1AQ16623 288 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 JAKMIP3Q5VZ66 844 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 RESP18Q5W5W9 173 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 TMEM184AQ6ZMB5 413 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 CKAP2LQ8IYA6 745 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 SIX5Q8N196 739 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 BPIFA3Q9BQP9 254 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 MXRA8Q9BRK3 442 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 CBX8Q9HC52 389 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 ERVK-5Q9HDB9 667 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 SH3GLB2Q9NR46 395 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 ANO10Q9NW15 660 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 PKD2L1Q9P0L9 805 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 VPS54Q9P1Q0 977 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 CDH22Q9UJ99 828 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 CEP131Q9UPN4 1083 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 ZKSCAN5Q9Y2L8 839 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 KAT6AQ92794 2004 aa9.68□□□□□ -0.86
HDAC1-202ENST00000428704 IGLV3-22A0A075B6J6 115 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 GSTTP1A0A1W2PQM5 241 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 FAM86B1E9PN63 330 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 H3BRB1 525 aa9.67□□□□□ -0.86
HDAC1-202ENST00000428704 NOP56O00567 594 aaKnown RBP9.67□□□□□ -0.86
HDAC1-202ENST00000428704 ACTN4O43707 911 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms