RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 RBBP7Q16576 425 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 PRG3Q9Y2Y8 225 aaPredicted RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 PTH1RQ03431 593 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 CSTF3Q12996 717 aaKnown RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 EPS8L2Q9H6S3 715 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 SERPINB13Q9UIV8 391 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 SNTNA6NMZ2 147 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 HADHAP40939 763 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 ZNF699Q32M78 642 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 RAPGEF5Q92565 580 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 C2orf40Q9H1Z8 148 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 ARL2BPQ9Y2Y0 163 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 C5orf58C9J3I9 102 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 NSUN7Q8NE18 718 aaKnown RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 HIPK4Q8NE63 616 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 ASAP3Q8TDY4 903 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 WDR62O43379 1518 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 TMED10P49755 219 aaKnown RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 ST13P50502 369 aaKnown RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 RASGRF1Q13972 1273 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 E2F4Q16254 413 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 TRIM71Q2Q1W2 868 aaKnown RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 HABP4Q5JVS0 413 aaKnown RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 LAMC1P11047 1609 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 CYTH1Q15438 398 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 EFHC2Q5JST6 749 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 MFN1Q8IWA4 741 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 ST13P5Q8NFI4 369 aaPredicted RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 DCAF4Q8WV16 495 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 KRT35Q92764 455 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 PAGE5Q96GU1 130 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 YIPF3Q9GZM5 350 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 SYBUQ9NX95 663 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 SDC4P31431 198 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 GGCXP38435 758 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPN13-203ENST00000427191 PARVBQ9HBI1 364 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 EIF2B5Q13144 721 aaKnown RBP15.29■□□□□ 0.04
PTPN13-203ENST00000427191 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 RHOT1Q8IXI2 618 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 P3H1Q32P28 736 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 BBS7Q8IWZ6 715 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 WBP4O75554 376 aaKnown RBP15.29■□□□□ 0.04
PTPN13-203ENST00000427191 PRAMEP78395 509 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 SLC7A5Q01650 507 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 TRIP13Q15645 432 aaPredicted RBP15.29■□□□□ 0.04
PTPN13-203ENST00000427191 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 B4GALNT2Q8NHY0 566 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 GANCQ8TET4 914 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 ZWILCHQ9H900 591 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 CEP78Q5JTW2 689 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 NRBP1Q9UHY1 535 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 DSTYKQ6XUX3 929 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 C11orf57Q6ZUT1 292 aaPredicted RBP15.29■□□□□ 0.04
PTPN13-203ENST00000427191 EGFL8Q99944 293 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 HUS1O60921 280 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 KLHL2O95198 593 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 ADRM1Q16186 407 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 XXYLT1Q8NBI6 393 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 URGCPQ8TCY9 931 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 ZFP42Q96MM3 310 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 OSBPL9Q96SU4 736 aa15.29■□□□□ 0.04
PTPN13-203ENST00000427191 CNOT8Q9UFF9 292 aaKnown RBP15.29■□□□□ 0.04
PTPN13-203ENST00000427191 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
PTPN13-203ENST00000427191 KIAA0391O15091 583 aaKnown RBP15.28■□□□□ 0.04
PTPN13-203ENST00000427191 MEI1Q5TIA1 1274 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 PDXDC2PQ6P474 469 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 SLC30A9Q6PML9 568 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 BEST2Q8NFU1 509 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 VPS11Q9H270 941 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.28■□□□□ 0.04
PTPN13-203ENST00000427191 CUL4AQ13619 759 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 RIBC1Q8N443 379 aaPredicted RBP15.28■□□□□ 0.04
PTPN13-203ENST00000427191 NGRNQ9NPE2 291 aaKnown RBP15.28■□□□□ 0.04
PTPN13-203ENST00000427191 PSD3Q9NYI0 1048 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 RFX7Q2KHR2 1363 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 AGTP01019 485 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 HIF1AQ16665 826 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 ADNPQ9H2P0 1102 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 SCN3BQ9NY72 215 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 IMPDH2P12268 514 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 ZFYVE19Q96K21 471 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 PI4KBQ9UBF8 816 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 YEATS2Q9ULM3 1422 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 SFNP31947 248 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 CCDC15Q0P6D6 951 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 CUL3Q13618 768 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 LRIG3Q6UXM1 1119 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 COG1Q8WTW3 980 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 SP110Q9HB58 689 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 DCDC2Q9UHG0 476 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 AP4S1Q9Y587 144 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 CCND1P24385 295 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 CYP2C19P33261 490 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 SERPINB9P50453 376 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 MRPS35P82673 323 aaKnown RBP15.28■□□□□ 0.04
PTPN13-203ENST00000427191 CC2D1AQ6P1N0 951 aaPredicted RBP15.28■□□□□ 0.04
PTPN13-203ENST00000427191 USP44Q9H0E7 712 aa15.28■□□□□ 0.04
PTPN13-203ENST00000427191 ASCC2Q9H1I8 757 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms