RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 NLGN1Q8N2Q7 840 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 ARFGAP2Q8N6H7 521 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 CCDC114Q96M63 670 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 PI4K2AQ9BTU6 479 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 SEMA4AQ9H3S1 761 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 CCPG1Q9ULG6 757 aa12.84□□□□□ -0.35
LIMK1-202ENST00000418310 FAM107AO95990 144 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 MMEP08473 750 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 LRRC14Q15048 493 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 CBWD2Q8IUF1 395 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 CD302Q8IX05 232 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 PLEKHO2Q8TD55 490 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 EPS8L3Q8TE67 593 aaKnown RBP12.83□□□□□ -0.36
LIMK1-202ENST00000418310 PCDHB18PQ96TA0 734 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 SLITRK6Q9H5Y7 841 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 COL20A1Q9P218 1284 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 DDX20Q9UHI6 824 aaKnown RBP12.83□□□□□ -0.36
LIMK1-202ENST00000418310 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-202ENST00000418310 TTC27Q6P3X3 843 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 MMS22LQ6ZRQ5 1243 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 ZDHHC14Q8IZN3 488 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 RASGEF1CQ8N431 466 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 C1orf54Q8WWF1 131 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 PSMD1Q99460 953 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 CD248Q9HCU0 757 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
LIMK1-202ENST00000418310 ANKRD62A6NC57 917 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 EIF3DO15371 548 aaKnown RBP eCLIP12.83□□□□□ -0.36
LIMK1-202ENST00000418310 PYGMP11217 842 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 BCRP11274 1271 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 KRT5P13647 590 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 PPATQ06203 517 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 DENND2CQ68D51 928 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 MICALCLQ6ZW33 695 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 ERP44Q9BS26 406 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 TRIM7Q9C029 511 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 RAB17Q9H0T7 212 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 FAM114A2Q9NRY5 505 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 KCNH7Q9NS40 1196 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 SLC12A6Q9UHW9 1150 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 FRMPD4Q14CM0 1322 aa12.83□□□□□ -0.36
LIMK1-202ENST00000418310 H0YIN7 160 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 ACSL3O95573 720 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 APBA3O96018 575 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 MXI1P50539 228 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 PMS2P54278 862 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 ACTN3Q08043 901 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 MAPK7Q13164 816 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 MTMR3Q13615 1198 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 KRT27Q7Z3Y8 459 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 NOP9Q86U38 636 aaKnown RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 GPATCH11Q8N954 259 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 ATG4AQ8WYN0 398 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 ZNF653Q96CK0 615 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 HSPBP1Q9NZL4 362 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 NENFQ9UMX5 172 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 ZHX2Q9Y6X8 837 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 YDJCA8MPS7 323 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 RPL21P46778 160 aaKnown RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 PTENP60484 403 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 UGCGQ16739 394 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 CCDC137Q6PK04 289 aaKnown RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 RNF25Q96BH1 459 aaPredicted RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 PWWP2AQ96N64 755 aa12.82□□□□□ -0.36
LIMK1-202ENST00000418310 RAVER2Q9HCJ3 691 aaKnown RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 LARSQ9P2J5 1176 aaKnown RBP12.82□□□□□ -0.36
LIMK1-202ENST00000418310 ADRB2P07550 413 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 CHN1P15882 459 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 SEL1L2Q5TEA6 688 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 LRIG3Q6UXM1 1119 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 PRELID2Q8N945 189 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 NEK9Q8TD19 979 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 NUP85Q9BW27 656 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 MTFR1LQ9H019 292 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 EFCC1Q9HA90 598 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 A0A0A6YYK5 440 aaPredicted RBP12.81□□□□□ -0.36
LIMK1-202ENST00000418310 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
LIMK1-202ENST00000418310 GTPBP10A4D1E9 387 aaKnown RBP12.81□□□□□ -0.36
LIMK1-202ENST00000418310 CLDN3O15551 220 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
LIMK1-202ENST00000418310 CETN1Q12798 172 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 PPP2R5CQ13362 524 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 PPP1R7Q15435 360 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 HAUS6Q7Z4H7 955 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 SEC16BQ96JE7 1060 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 RGS16O15492 202 aaPredicted RBP12.81□□□□□ -0.36
LIMK1-202ENST00000418310 CCDC172P0C7W6 258 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 XKR9Q5GH70 373 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 SLC27A3Q5K4L6 730 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 UBL4BQ8N7F7 174 aa12.81□□□□□ -0.36
LIMK1-202ENST00000418310 SEMA4DQ92854 862 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms