RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 MCM8Q9UJA3 840 aa7.11□□□□□ -1.27
NIFKP3-201ENST00000417799 CASZ1Q86V15 1759 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 DDX60Q8IY21 1712 aaKnown RBP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 NRXN2Q9P2S2 1712 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 TRAF5O00463 557 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 NPR1P16066 1061 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 PDE6AP16499 860 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 IGHMBP2P38935 993 aaKnown RBP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 RPS8P62241 208 aaKnown RBP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 LACTBP83111 547 aaPredicted RBP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 GPR19Q15760 415 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 LRRC24Q50LG9 513 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 WWC2Q6AWC2 1192 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 LDHAL6AQ6ZMR3 332 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 OSTM1Q86WC4 334 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 CHD1LQ86WJ1 897 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 DDX42Q86XP3 938 aaKnown RBP eCLIP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 ANKRD18AQ8IVF6 992 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 C2orf69Q8N8R5 385 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 CHST14Q8NCH0 376 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 ATL2Q8NHH9 583 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 RPGRQ92834 1020 aaKnown RBP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 KIF1BPQ96EK5 621 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 CRAMP1Q96RY5 1269 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 MPHOSPH8Q99549 860 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 PUS3Q9BZE2 481 aaKnown RBP7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 LRRCC1Q9C099 1032 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 CNNM1Q9NRU3 951 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 ZKSCAN5Q9Y2L8 839 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 RIPOR2Q9Y4F9 1068 aa7.1□□□□□ -1.27
NIFKP3-201ENST00000417799 H0YIN7 160 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 KRIT1O00522 736 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 BBOX1O75936 387 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 SASH1O94885 1247 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 F2P00734 622 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 GLI4P10075 376 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 SRGNP10124 158 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 KRT15P19012 456 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 MECP2P51608 486 aaKnown RBP7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 TFCP2Q12800 502 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 GRAPQ13588 217 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 SART3Q15020 963 aaKnown RBP7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 SKOR2Q2VWA4 1001 aaPredicted RBP7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 HABP4Q5JVS0 413 aaKnown RBP7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 ARHGAP36Q6ZRI8 547 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 C2CD5Q86YS7 1000 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 RPUSD2Q8IZ73 545 aaKnown RBP7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 NXPE1Q8N323 547 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 PIP4K2CQ8TBX8 421 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 GRAPLQ8TC17 118 aaPredicted RBP7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 CELF1Q92879 486 aaKnown RBP7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 USP7Q93009 1102 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 MASTLQ96GX5 879 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 RNF32Q9H0A6 362 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 SPON1Q9HCB6 807 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 SLC6A20Q9NP91 592 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 B4GALT6Q9UBX8 382 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 LAMB2P55268 1798 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 MYH3P11055 1940 aa7.09□□□□□ -1.27
NIFKP3-201ENST00000417799 MROH5Q6ZUA9 1318 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 PTPDC1A2A3K4 754 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 ZNF891A8MT65 544 aaPredicted RBP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 NKRFO15226 690 aaKnown RBP eCLIP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 GAS7O60861 476 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 EYA4O95677 639 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 CDK11BP21127 795 aaKnown RBP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 ALDH1B1P30837 517 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 CDKN1CP49918 316 aaPredicted RBP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 JAM2P57087 298 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 ARHGAP44Q17R89 818 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 METTL24Q5JXM2 366 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 STEAP3Q658P3 488 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 CLASRPQ8N2M8 674 aaKnown RBP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 PRPF38AQ8NAV1 312 aaKnown RBP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 NETO2Q8NC67 525 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 ZNF622Q969S3 477 aaKnown RBP eCLIP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 KIRREL1Q96J84 757 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 IL1RAPL2Q9NP60 686 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 TNFRSF12AQ9NP84 129 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 ZFP64Q9NPA5 681 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 YBX2Q9Y2T7 364 aaKnown RBP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 TNRC6CQ9HCJ0 1690 aaKnown RBP7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 C10orf71Q711Q0 1435 aa7.08□□□□□ -1.28
NIFKP3-201ENST00000417799 TCRBV5S4A2TA0A5A2 114 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 MAFKO60675 156 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 AMY2AP04746 511 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 DBHP09172 617 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 DPEP1P16444 411 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 AMY2BP19961 511 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 CHRNA5P30532 468 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 SLC6A11P48066 632 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 TGFB2P61812 414 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 DSG1Q02413 1049 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 CHRNDQ07001 517 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 FYB2Q5VWT5 728 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 EP400NLQ6ZTU2 488 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 SKAP1Q86WV1 359 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 DCP2Q8IU60 420 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms