RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DNAJB4Q9UDY4 337 aa16.12■□□□□ 0.17
PAF1-202ENST00000416728 ASAP2O43150 1006 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 ERLIN2O94905 339 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 CTDNEP1O95476 244 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 HOXA11P31270 313 aaPredicted RBP16.11■□□□□ 0.17
PAF1-202ENST00000416728 KRT2P35908 639 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 ANAPC15P60006 121 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 SPIRE1Q08AE8 756 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 NR5A1Q13285 461 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 CTTNQ14247 550 aaKnown RBP16.11■□□□□ 0.17
PAF1-202ENST00000416728 EARS2Q5JPH6 523 aaKnown RBP16.11■□□□□ 0.17
PAF1-202ENST00000416728 RARS2Q5T160 578 aaKnown RBP16.11■□□□□ 0.17
PAF1-202ENST00000416728 MRPL10Q7Z7H8 261 aaKnown RBP16.11■□□□□ 0.17
PAF1-202ENST00000416728 FERMT3Q86UX7 667 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 ZNF280BQ86YH2 543 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 ASIC4Q96FT7 647 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 FAM193BQ96PV7 902 aaPredicted RBP16.11■□□□□ 0.17
PAF1-202ENST00000416728 PRRX2Q99811 253 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 KANSL3Q9P2N6 904 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 STK39Q9UEW8 545 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 CNTNAP2Q9UHC6 1331 aa16.11■□□□□ 0.17
PAF1-202ENST00000416728 ZNF318Q5VUA4 2279 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 NEFLP07196 543 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 WEE2P0C1S8 567 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 EPCAMP16422 314 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 AK2P54819 239 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 IER5LQ5T953 404 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 TPH2Q8IWU9 490 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 C12orf76Q8N812 135 aaPredicted RBP16.1■□□□□ 0.17
PAF1-202ENST00000416728 MTRQ99707 1265 aa16.1■□□□□ 0.17
PAF1-202ENST00000416728 C2CD4DB7Z1M9 353 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 ZBTB39O15060 712 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 B4GALT3O60512 393 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 DDHD2O94830 711 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 ALDH2P05091 517 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 PTPN5P54829 565 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
PAF1-202ENST00000416728 PTPN14Q15678 1187 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 ATAT1Q5SQI0 421 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 UBXN11Q5T124 520 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 KIAA1841Q6NSI8 718 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 CABP7Q86V35 215 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 CNNM3Q8NE01 707 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 PRSS33Q8NF86 280 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 SLC22A17Q8WUG5 538 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 TMEM175Q9BSA9 504 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 VN1R3Q9BXE9 311 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 PCDHA12Q9UN75 941 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 FAN1Q9Y2M0 1017 aa16.09■□□□□ 0.17
PAF1-202ENST00000416728 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 SLITRK3O94933 977 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 POMCP01189 267 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 FDPSP14324 419 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 AFF1P51825 1210 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 NCBP1Q09161 790 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 MTMR3Q13615 1198 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 TFDP1Q14186 410 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 PCBP1Q15365 356 aaKnown RBP eCLIP16.08■□□□□ 0.16
PAF1-202ENST00000416728 CALCRLQ16602 461 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 TDRD5Q8NAT2 981 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 TNFRSF25Q93038 417 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 CCDC43Q96MW1 224 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 EIF2AK1Q9BQI3 630 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 EMILIN2Q9BXX0 1053 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 UBN1Q9NPG3 1134 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 XPNPEP1Q9NQW7 623 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 DBR1Q9UK59 544 aaKnown RBP16.08■□□□□ 0.16
PAF1-202ENST00000416728 SORCS3Q9UPU3 1222 aa16.08■□□□□ 0.16
PAF1-202ENST00000416728 INO80B-WBP1J3KQ70 363 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 NRP1O14786 923 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 TSPAN1O60635 241 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 SSBP05455 408 aaKnown RBP eCLIP16.07■□□□□ 0.16
PAF1-202ENST00000416728 ITGA4P13612 1032 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 KLRC2P26717 231 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 AXLP30530 894 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 PTENP60484 403 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 ME3Q16798 604 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 KANK3Q6NY19 840 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 NOTUMQ6P988 496 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 TMC5Q6UXY8 1006 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 UBALD2Q8IYN6 164 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 IPPQ9Y573 584 aa16.07■□□□□ 0.16
PAF1-202ENST00000416728 NEMFO60524 1076 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 DGAT1O75907 488 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 LYPLA2O95372 231 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 VCPP55072 806 aaKnown RBP16.06■□□□□ 0.16
PAF1-202ENST00000416728 TRIM29Q14134 588 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 ZDHHC14Q8IZN3 488 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 SMG8Q8ND04 991 aaKnown RBP16.06■□□□□ 0.16
PAF1-202ENST00000416728 KLHL5Q96PQ7 755 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 HSD17B14Q9BPX1 270 aa16.06■□□□□ 0.16
PAF1-202ENST00000416728 EIF2AQ9BY44 585 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms