RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PSMD10O75832 226 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 KIF20AO95235 890 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 GYPCP04921 128 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 SPATA31C1P0DKV0 1188 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 DNM2P50570 870 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 CHMP4BP1P59074 171 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 HTRA4P83105 476 aaPredicted RBP18.82■□□□□ 0.6
PTPRC-206ENST00000413409 RBL2Q08999 1139 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 GOLGA8FQ08AF8 430 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 GOLGA8DPQ0D2H9 430 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 CEP55Q53EZ4 464 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 TRAF7Q6Q0C0 670 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 POTEGQ6S5H5 508 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 CATSPER3Q86XQ3 398 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 MYOCDQ8IZQ8 938 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 ZNF507Q8TCN5 953 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 CLEC4DQ8WXI8 215 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 TSG101Q99816 390 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 PANK4Q9NVE7 773 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 DNM3Q9UQ16 869 aa18.82■□□□□ 0.6
PTPRC-206ENST00000413409 H3BNC9 293 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 MBTPS2O43462 519 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 CKBP12277 381 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 ALDH5A1P51649 535 aaPredicted RBP18.81■□□□□ 0.6
PTPRC-206ENST00000413409 ADKP55263 362 aaKnown RBP18.81■□□□□ 0.6
PTPRC-206ENST00000413409 UBXN1Q04323 297 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
PTPRC-206ENST00000413409 GPM6BQ13491 265 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 IKBKEQ14164 716 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 MBTPS1Q14703 1052 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 CTC1Q2NKJ3 1217 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 LRCH2Q5VUJ6 765 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 RPAINQ86UA6 219 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 CCDC155Q8N6L0 562 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 SYT2Q8N9I0 419 aaPredicted RBP18.81■□□□□ 0.6
PTPRC-206ENST00000413409 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 IQCDQ96DY2 449 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 PRRX2Q99811 253 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 TRMT1Q9NXH9 659 aaKnown RBP18.81■□□□□ 0.6
PTPRC-206ENST00000413409 WDR87Q6ZQQ6 2873 aa18.81■□□□□ 0.6
PTPRC-206ENST00000413409 MEIS1O00470 390 aa18.8■□□□□ 0.6
PTPRC-206ENST00000413409 KPNA6O60684 536 aa18.8■□□□□ 0.6
PTPRC-206ENST00000413409 EYA4O95677 639 aa18.8■□□□□ 0.6
PTPRC-206ENST00000413409 BAATQ14032 418 aaPredicted RBP18.8■□□□□ 0.6
PTPRC-206ENST00000413409 ZCWPW2Q504Y3 356 aa18.8■□□□□ 0.6
PTPRC-206ENST00000413409 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
PTPRC-206ENST00000413409 EIF2AK1Q9BQI3 630 aaKnown RBP18.8■□□□□ 0.6
PTPRC-206ENST00000413409 TUBGCP2Q9BSJ2 902 aa18.8■□□□□ 0.6
PTPRC-206ENST00000413409 NSUN3Q9H649 340 aaKnown RBP18.8■□□□□ 0.6
PTPRC-206ENST00000413409 KMT2EQ8IZD2 1858 aa18.8■□□□□ 0.6
PTPRC-206ENST00000413409 SSBP05455 408 aaKnown RBP eCLIP18.79■□□□□ 0.6
PTPRC-206ENST00000413409 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
PTPRC-206ENST00000413409 B3GNT9Q6UX72 402 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 LRRC55Q6ZSA7 311 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 CYP2W1Q8TAV3 490 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 WNT8BQ93098 351 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 RIT2Q99578 217 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 PPP2R2CQ9Y2T4 447 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 PCDHA2Q9Y5H9 948 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 VPS13AQ96RL7 3174 aa18.79■□□□□ 0.6
PTPRC-206ENST00000413409 GAS7O60861 476 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 EFCAB14O75071 495 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 CASP14P31944 242 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 MTIF2P46199 727 aaKnown RBP18.78■□□□□ 0.6
PTPRC-206ENST00000413409 VCPP55072 806 aaKnown RBP18.78■□□□□ 0.6
PTPRC-206ENST00000413409 TRIM71Q2Q1W2 868 aaKnown RBP18.78■□□□□ 0.6
PTPRC-206ENST00000413409 ARSHQ5FYA8 562 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 SESTD1Q86VW0 696 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 REXO1L1PQ8IX06 675 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 ZC3H3Q8IXZ2 948 aaKnown RBP18.78■□□□□ 0.6
PTPRC-206ENST00000413409 FBXL6Q8N531 539 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 KIF18AQ8NI77 898 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 KAT2BQ92831 832 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 CEP63Q96MT8 703 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 ERGIC2Q96RQ1 377 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 POP1Q99575 1024 aaKnown RBP18.78■□□□□ 0.6
PTPRC-206ENST00000413409 MXRA8Q9BRK3 442 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 NUP58Q9BVL2 599 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 TEKT3Q9BXF9 490 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 MAF1Q9H063 256 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 FAM186AA6NE01 2351 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 PLXNA3P51805 1871 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 PHLPP2Q6ZVD8 1323 aa18.78■□□□□ 0.6
PTPRC-206ENST00000413409 EML1O00423 815 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 NFIBO00712 420 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 RIOK3O14730 519 aaKnown RBP18.77■□□□□ 0.6
PTPRC-206ENST00000413409 PARNO95453 639 aaKnown RBP18.77■□□□□ 0.6
PTPRC-206ENST00000413409 KRT18P05783 430 aaKnown RBP18.77■□□□□ 0.6
PTPRC-206ENST00000413409 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
PTPRC-206ENST00000413409 MAN2A1Q16706 1144 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 FIGNQ5HY92 759 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 TMTC1Q8IUR5 882 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 SUGP1Q8IWZ8 645 aaKnown RBP18.77■□□□□ 0.6
PTPRC-206ENST00000413409 TMEM192Q8IY95 271 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 HSD17B14Q9BPX1 270 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 ABHD10Q9NUJ1 306 aa18.77■□□□□ 0.6
PTPRC-206ENST00000413409 B4DLN1 442 aa18.76■□□□□ 0.59
PTPRC-206ENST00000413409 NKRFO15226 690 aaKnown RBP eCLIP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms