RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 RSPH1Q8WYR4 309 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 CDK5RAP1Q96SZ6 601 aaKnown RBP8.06□□□□□ -1.12
SH3D19-203ENST00000409598 FAM8A1Q9UBU6 413 aa8.06□□□□□ -1.12
SH3D19-203ENST00000409598 KDM1AO60341 852 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 SYT1P21579 422 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 FAM193AP78312 1265 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 PCBP1Q15365 356 aaKnown RBP eCLIP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 BZW1Q7L1Q6 419 aaKnown RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 CNGA4Q8IV77 575 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 LRRC43Q8N309 656 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 STAG2Q8N3U4 1231 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 KCNH7Q9NS40 1196 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 FAM217BQ9NTX9 383 aaPredicted RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 MAPK8IP1Q9UQF2 711 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 SLIT3O75094 1523 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 KLHL30Q0D2K2 578 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 SCARA5Q6ZMJ2 495 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 TAOK1Q7L7X3 1001 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 OTOP2Q7RTS6 562 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 AFAP1L1Q8TED9 768 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 CENPHQ9H3R5 247 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 JADE2Q9NQC1 790 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 FZD1Q9UP38 647 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 A0A0G2JLL6 359 aaPredicted RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 ZNF286BP0CG31 522 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 SYN1P17600 705 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 CD58P19256 250 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 CASQ1P31415 396 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 TUFMP49411 452 aaKnown RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 CDK17Q00537 523 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 MYL5Q02045 173 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 SFMBT2Q5VUG0 894 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 PRRT2Q7Z6L0 340 aaPredicted RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 ANKLE1Q8NAG6 615 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 DNAJB3Q8WWF6 145 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 SNX19Q92543 992 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 GPR20Q99678 358 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 JMJD4Q9H9V9 463 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 C17orf75Q9HAS0 396 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 CYP4F11Q9HBI6 524 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 EMILIN3Q9NT22 766 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 SPG21Q9NZD8 308 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 MRPS23Q9Y3D9 190 aaKnown RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 NR2E1Q9Y466 385 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 PTGS1P23219 599 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 MRPS6P82932 125 aaKnown RBP8.05□□□□□ -1.12
SH3D19-203ENST00000409598 TMEM143Q96AN5 459 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 PDCD2LQ9BRP1 358 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 LCMT1Q9UIC8 334 aa8.05□□□□□ -1.12
SH3D19-203ENST00000409598 LRP6O75581 1613 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 CKBP12277 381 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 CKAP4Q07065 602 aaKnown RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 PPP1R7Q15435 360 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 PABPC1LQ4VXU2 614 aaKnown RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 SPECC1Q5M775 1068 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 FAM43BQ6ZT52 329 aaPredicted RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 GPD1LQ8N335 351 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 LRRC71Q8N4P6 559 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 SYTL5Q8TDW5 730 aaPredicted RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 ASIC4Q96FT7 647 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 ABHD8Q96I13 439 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 LSG1Q9H089 658 aaKnown RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 RBAKQ9NYW8 714 aaPredicted RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 ANAPC4Q9UJX5 808 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 ZNF189O75820 626 aaPredicted RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 EYA4O95677 639 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 TLE2Q04725 743 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 GTF2H3Q13889 308 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 HLTFQ14527 1009 aaKnown RBP eCLIP8.04□□□□□ -1.126e-7■□□□□ 8.6
SH3D19-203ENST00000409598 PPP1R21Q6ZMI0 780 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 ZNF365Q70YC5 407 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 LRRC8DQ7L1W4 858 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 SYCE1Q8N0S2 351 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 GPR161Q8N6U8 529 aaKnown RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 BRI3BPQ8WY22 251 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 FAM213AQ9BRX8 229 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 BLZF1Q9H2G9 400 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 RASSF4Q9H2L5 321 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 RSAD1Q9HA92 442 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 SLC39A2Q9NP94 309 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 CAND2O75155 1236 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 KCNA10Q16322 511 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 KIZQ2M2Z5 673 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 RGL4Q8IZJ4 473 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 REPS2Q8NFH8 660 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 FAM198AQ9UFP1 575 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 JAK2O60674 1132 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 S100BP04271 92 aaPredicted RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 MBL2P11226 248 aaPredicted RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 CALCOCO2Q13137 446 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 KARSQ15046 597 aaKnown RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 PRAMEF19Q5SWL8 479 aa8.04□□□□□ -1.12
SH3D19-203ENST00000409598 RWDD4Q6NW29 188 aaKnown RBP8.04□□□□□ -1.12
SH3D19-203ENST00000409598 ARMC6Q6NXE6 501 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms