RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 CAVIN3Q969G5 261 aa11.65□□□□□ -0.54
LINC00649-202ENST00000400353 PSMB7Q99436 277 aa11.65□□□□□ -0.54
LINC00649-202ENST00000400353 GPR88Q9GZN0 384 aa11.65□□□□□ -0.54
LINC00649-202ENST00000400353 RBM12Q9NTZ6 932 aaKnown RBP11.65□□□□□ -0.54
LINC00649-202ENST00000400353 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.65□□□□□ -0.54
LINC00649-202ENST00000400353 TBX20Q9UMR3 447 aa11.65□□□□□ -0.54
LINC00649-202ENST00000400353 SLC16A4O15374 487 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 GTF2H1P32780 548 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 MATR3P43243 847 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00649-202ENST00000400353 GALCP54803 685 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 ANGEL2Q5VTE6 544 aaKnown RBP11.64□□□□□ -0.55
LINC00649-202ENST00000400353 PEX26Q7Z412 305 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 GOLGA6L1Q8N7Z2 621 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 EIF1ADQ8N9N8 165 aaKnown RBP11.64□□□□□ -0.55
LINC00649-202ENST00000400353 USP38Q8NB14 1042 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 AGPAT1Q99943 283 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
LINC00649-202ENST00000400353 PCIF1Q9H4Z3 704 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 KMT5AQ9NQR1 393 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 AMFRQ9UKV5 643 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 ZNF214Q9UL59 606 aaPredicted RBP11.64□□□□□ -0.55
LINC00649-202ENST00000400353 STXBP5LQ9Y2K9 1186 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 CCDC66A2RUB6 948 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 ANKRD62A6NC57 917 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 CCDC188H7C350 402 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 KCNK3O14649 394 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 DGAT1O75907 488 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 KCNA2P16389 499 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 MXI1P50539 228 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 HMGCS2P54868 508 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 PAK2Q13177 524 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 TCEAL1Q15170 157 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 SH3D19Q5HYK7 790 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 MIS18BP1Q6P0N0 1132 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 RHOT2Q8IXI1 618 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 RDH13Q8NBN7 331 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 TMEM161BQ8NDZ6 487 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 CHST13Q8NET6 341 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 KLRG1Q96E93 195 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 CEP170P1Q96L14 293 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 FAM81BQ96LP2 452 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 GDF3Q9NR23 364 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 GABBR1Q9UBS5 961 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 SLC9A2Q9UBY0 812 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 TMEM59LQ9UK28 342 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 RIPK3Q9Y572 518 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 PFASO15067 1338 aa11.64□□□□□ -0.55
LINC00649-202ENST00000400353 CCDC169A6NNP5 214 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 PGRMC1O00264 195 aaKnown RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 NPTX2P47972 431 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 HADHBP55084 474 aaKnown RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 TMEM132BQ14DG7 1078 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 ARHGAP44Q17R89 818 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 PLA2G4FQ68DD2 849 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 PHLDB3Q6NSJ2 640 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 ANO5Q75V66 913 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 GLYCTKQ8IVS8 523 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 RASGEF1CQ8N431 466 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 DNERQ8NFT8 737 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 OLIG1Q8TAK6 271 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 KCNN1Q92952 543 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 ZKSCAN4Q969J2 545 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 MS4A14Q96JA4 679 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 JPH1Q9HDC5 661 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 UBE2TQ9NPD8 197 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 CYP39A1Q9NYL5 469 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 EHD2Q9NZN4 543 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 VPS18Q9P253 973 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 DMGDHQ9UI17 866 aaKnown RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 RLFQ13129 1914 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 MYH10P35580 1976 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 GARTP22102 1010 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 MFAP3P55082 362 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 PPP3CAQ08209 521 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 GPR162Q16538 588 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 ALS2CLQ60I27 953 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 RINLQ6ZS11 566 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 SND1Q7KZF4 910 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 SCFD2Q8WU76 684 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 IFT74Q96LB3 600 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 TMEM8AQ9HCN3 771 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 SMARCAL1Q9NZC9 954 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 ADAM21Q9UKJ8 722 aa11.63□□□□□ -0.55
LINC00649-202ENST00000400353 TTC7AQ9ULT0 858 aaPredicted RBP11.63□□□□□ -0.55
LINC00649-202ENST00000400353 ZNF541Q9H0D2 1346 aa11.62□□□□□ -0.55
LINC00649-202ENST00000400353 DENND3A2RUS2 1198 aa11.62□□□□□ -0.55
LINC00649-202ENST00000400353 TMCO5BA8MYB1 307 aa11.62□□□□□ -0.55
LINC00649-202ENST00000400353 FOXN3O00409 490 aaPredicted RBP11.62□□□□□ -0.55
LINC00649-202ENST00000400353 CEP104O60308 925 aa11.62□□□□□ -0.55
LINC00649-202ENST00000400353 OPA1O60313 960 aa11.62□□□□□ -0.55
LINC00649-202ENST00000400353 ZMYND10O75800 440 aa11.62□□□□□ -0.55
LINC00649-202ENST00000400353 STBD1O95210 358 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms