RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 BTG3Q14201 252 aaPredicted RBP13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 NCAPH2Q6IBW4 605 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 ANO5Q75V66 913 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 TMEM192Q8IY95 271 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 GDPD5Q8WTR4 605 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 ZNF689Q96CS4 500 aaPredicted RBP13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 ADAM2Q99965 735 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 SH2D3AQ9BRG2 576 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 COL25A1Q9BXS0 654 aaPredicted RBP13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 FAM117AQ9C073 453 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 RGS18Q9NS28 235 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 PCDHB7Q9Y5E2 793 aa13.18□□□□□ -0.3
SMIM11A-201ENST00000399292 IGKV6-21A0A0C4DH24 114 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 NEMFO60524 1076 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 MAFO75444 373 aaPredicted RBP13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 ATP2B1P20020 1258 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 TXKP42681 527 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 SARSP49591 514 aaKnown RBP13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 GPM6BQ13491 265 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 C4orf19Q8IY42 314 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 CEP89Q96ST8 783 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 FOXP1Q9H334 677 aaPredicted RBP13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 ZSWIM4Q9H7M6 989 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 TTC12Q9H892 705 aaPredicted RBP13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 CYP26B1Q9NR63 512 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 C1orf112Q9NSG2 853 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 SUCLA2Q9P2R7 463 aaPredicted RBP13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 THEGQ9P2T0 379 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 RWDD3Q9Y3V2 267 aa13.17□□□□□ -0.3
SMIM11A-201ENST00000399292 ADGRA3Q8IWK6 1321 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 MYO9BQ13459 2157 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 H3BNC9 293 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 MGEA5O60502 916 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 SLITRK3O94933 977 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 RB1P06400 928 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 BMPR1AP36894 532 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 GPC3P51654 580 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 NPEPPSP55786 919 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 FAM189BP81408 668 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 SPIRE1Q08AE8 756 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 DRP2Q13474 957 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 NR6A1Q15406 480 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 PTPROQ16827 1216 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 PLA2G4FQ68DD2 849 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 CLP1Q92989 425 aaKnown RBP13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 DYDC2Q96IM9 177 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 ZNF668Q96K58 619 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 CEP170P1Q96L14 293 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 LXNQ9BS40 222 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 RC3H2Q9HBD1 1191 aaKnown RBP13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 RGL1Q9NZL6 768 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 CDV3Q9UKY7 258 aaKnown RBP13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
SMIM11A-201ENST00000399292 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 DARSP14868 501 aaKnown RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 MCM7P33993 719 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 CTNNB1P35222 781 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 MCM2P49736 904 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 MRPS5P82675 430 aaKnown RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 CTTNQ14247 550 aaKnown RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 PPP1R26Q5T8A7 1209 aaPredicted RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 ASB2Q96Q27 587 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 HSD17B14Q9BPX1 270 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 EIF2AK1Q9BQI3 630 aaKnown RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 INO80BQ9C086 356 aaPredicted RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 WRAP73Q9P2S5 460 aaPredicted RBP13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 DNMT3LQ9UJW3 386 aa13.15□□□□□ -0.3
SMIM11A-201ENST00000399292 A0A087WZ62 844 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 C9IYK1 514 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 C5orf67F2Z3F1 127 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 ZBTB39O15060 712 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 RFC5P40937 340 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 POLGP54098 1239 aaPredicted RBP13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 DSC3Q14574 896 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 AAK1Q2M2I8 961 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 PAN2Q504Q3 1202 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 XKR9Q5GH70 373 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 NOSTRINQ8IVI9 506 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms