RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 IL31RAQ8NI17 732 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 CCDC26Q8TAB7 109 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 TNFRSF25Q93038 417 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 MYO1FO00160 1098 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF286BP0CG31 522 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 MAPTP10636 758 aaKnown RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 THPOP40225 353 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 FAM193AP78312 1265 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 IQCB1Q15051 598 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 PTPN21Q16825 1174 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 TAF2Q6P1X5 1199 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 SND1Q7KZF4 910 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 MAIP1Q8WWC4 291 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 INTS2Q9H0H0 1204 aaKnown RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 RSPH10B2B2RC85 870 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 EXTL3O43909 919 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 RSPH10BP0C881 870 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 SKIP12755 728 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 PSMC6P62333 389 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 PAK2Q13177 524 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 BFSP2Q13515 415 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 GRIK4Q16099 956 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 MSL3Q8N5Y2 521 aaKnown RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 PURBQ96QR8 312 aaKnown RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 LRRC4Q9HBW1 653 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 MRPL47Q9HD33 250 aaKnown RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 AGPAT3Q9NRZ7 376 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF214Q9UL59 606 aaPredicted RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 GPR182O15218 404 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 CA12O43570 354 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 CABYRO75952 493 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 EIF4A3P38919 411 aaKnown RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 CCDC144BQ3MJ40 725 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 DCAF4L1Q3SXM0 396 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 BRI3BPQ8WY22 251 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 MORC2Q9Y6X9 1032 aaPredicted RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 CEP104O60308 925 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 MFSD10Q14728 455 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 ETNPPLQ8TBG4 499 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF653Q96CK0 615 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 NHEJ1Q9H9Q4 299 aaPredicted RBP8.92□□□□□ -0.98
PTPRD-204ENST00000397606 IFT122Q9HBG6 1241 aa8.92□□□□□ -0.98
PTPRD-204ENST00000397606 FRMPD4Q14CM0 1322 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 LGALS2P05162 132 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 CLTAP09496 248 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 KCNJ6P48051 423 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 RBP5P82980 135 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 PPP1R7Q15435 360 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 ELMSAN1Q6PJG2 1045 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF720Q7Z2F6 126 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 ZBED3Q96IU2 234 aaPredicted RBP8.91□□□□□ -0.98
PTPRD-204ENST00000397606 KIFC3Q9BVG8 833 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 SLC38A7Q9NVC3 462 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TLR2O60603 784 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 ITGA4P13612 1032 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 FLT3LGP49771 235 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TMEM132DQ14C87 1099 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 CFAP221Q4G0U5 840 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TRIM50Q86XT4 487 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 FAM149B1Q96BN6 582 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 CCDC114Q96M63 670 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 PORCNQ9H237 461 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 SETD4Q9NVD3 440 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TOM1L1O75674 476 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 GARTP22102 1010 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 ELF1P32519 619 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 PSEN2P49810 448 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 RNASE9P60153 205 aaKnown RBP8.91□□□□□ -0.98
PTPRD-204ENST00000397606 IFRD2Q12894 506 aaPredicted RBP8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TMEM270Q6UE05 265 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 GLB1LQ6UWU2 654 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 RBM43Q6ZSC3 357 aaKnown RBP8.91□□□□□ -0.98
PTPRD-204ENST00000397606 CLEC4DQ8WXI8 215 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 SYNGAP1Q96PV0 1343 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 FAM237AA0A1B0GTK4 181 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 OGTO15294 1046 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 P4HA2O15460 535 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TRAPPC3O43617 180 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TBC1D8O95759 1140 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 ABL1P00519 1130 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 CD4P01730 458 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 FMO5P49326 533 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 KIF11P52732 1056 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TSPY1Q01534 308 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 CALCOCO2Q13137 446 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 NFRKBQ6P4R8 1299 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 ALKBH5Q6P6C2 394 aaKnown RBP8.91□□□□□ -0.98
PTPRD-204ENST00000397606 IFNL1Q8IU54 200 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 CCDC60Q8IWA6 550 aaPredicted RBP8.91□□□□□ -0.98
PTPRD-204ENST00000397606 TMEM35BQ8NCS4 154 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 RNF208Q9H0X6 261 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 RBPJLQ9UBG7 517 aa8.91□□□□□ -0.98
PTPRD-204ENST00000397606 A0A1B0GTH6 734 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 NDUFA10O95299 355 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ANXA13P27216 316 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 ARPP19P56211 112 aa8.9□□□□□ -0.98
PTPRD-204ENST00000397606 JAG1P78504 1218 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms