RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MAPK13O15264 365 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 SETSIPP0DME0 302 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 TGFB2P61812 414 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 CDK17Q00537 523 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 DCAF4L1Q3SXM0 396 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 RYBPQ8N488 228 aaPredicted RBP16.66■□□□□ 0.26
GNE-202ENST00000396594 CPSF2Q9P2I0 782 aaKnown RBP16.66■□□□□ 0.26
GNE-202ENST00000396594 CYP2D7A0A087X1C5 515 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
GNE-202ENST00000396594 RHOBTB3O94955 611 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 CYP2C8P10632 490 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 STAT5BP51692 787 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 SPP2Q13103 211 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 POC1B-GALNT4F8VUJ3 575 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 MAPRE2Q15555 327 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 ANO4Q32M45 955 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 LRRC37BQ96QE4 947 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
GNE-202ENST00000396594 TAF11Q15544 211 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 CRLF3Q8IUI8 442 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 CFAP61Q8NHU2 1237 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 FAF2Q96CS3 445 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 SUDS3Q9H7L9 328 aaPredicted RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 ZWILCHQ9H900 591 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 ANAPC7Q9UJX3 599 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 DPYSL4O14531 572 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 CHUKO15111 745 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 CLNS1AP54105 237 aaKnown RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 CCDC15Q0P6D6 951 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 SFSWAPQ12872 951 aaKnown RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 TBC1D10BQ4KMP7 808 aaPredicted RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 TTC23LQ6PF05 361 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 MGARPQ8TDB4 240 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 ZNF70Q9UC06 446 aaPredicted RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 SALL1Q9NSC2 1324 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 NKRFO15226 690 aaKnown RBP eCLIP16.65■□□□□ 0.26
GNE-202ENST00000396594 PLS3P13797 630 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 GNA15P30679 374 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 PDXDC1Q6P996 788 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 ZNF564Q8TBZ8 553 aaPredicted RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 ASAP3Q8TDY4 903 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 EPAS1Q99814 870 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 RBAKQ9NYW8 714 aaPredicted RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 HBP1O60381 514 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 VPS41P49754 854 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 SLC26A2P50443 739 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 MAPRE1Q15691 268 aaKnown RBP16.65■□□□□ 0.26
GNE-202ENST00000396594 SNCBQ16143 134 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 SGSM1Q2NKQ1 1148 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 HAUS6Q7Z4H7 955 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 RCOR2Q8IZ40 523 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 GPATCH11Q8N954 259 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 IFT43Q96FT9 208 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 UBN1Q9NPG3 1134 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 SUN2Q9UH99 717 aa16.65■□□□□ 0.26
GNE-202ENST00000396594 KRT16P08779 473 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 LAMC2Q13753 1193 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 TBC1D19Q8N5T2 526 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 TEX12Q9BXU0 123 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 STK33Q9BYT3 514 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 LARGE1O95461 756 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 GCLCP48506 637 aaPredicted RBP16.64■□□□□ 0.25
GNE-202ENST00000396594 PKP1Q13835 747 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 MYBPC2Q14324 1141 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 NWD1Q149M9 1564 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 MTHFD1LQ6UB35 978 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 DCP1BQ8IZD4 617 aaKnown RBP16.64■□□□□ 0.25
GNE-202ENST00000396594 TTC8Q8TAM2 541 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 TRIM54Q9BYV2 358 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 KBTBD13C9JR72 458 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 HOXA2O43364 376 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 CYP2D6P10635 497 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 ERCC3P19447 782 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 YWHABP31946 246 aaKnown RBP16.64■□□□□ 0.25
GNE-202ENST00000396594 ZNF746Q6NUN9 644 aaPredicted RBP16.64■□□□□ 0.25
GNE-202ENST00000396594 ZBED2Q9BTP6 218 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 BFARQ9NZS9 450 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 PRKCBP05771 671 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 GTF2H1P32780 548 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 SWSAP1Q6NVH7 229 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 ATP11CQ8NB49 1132 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 KIAA1257Q9ULG3 409 aa16.64■□□□□ 0.25
GNE-202ENST00000396594 CPT1AP50416 773 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 UGP2Q16851 508 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 ANKRD13AQ8IZ07 590 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.63■□□□□ 0.25
GNE-202ENST00000396594 CD58P19256 250 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 PRCPP42785 496 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 TMED2Q15363 201 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 SV2CQ496J9 727 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 SPOPLQ6IQ16 392 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 MTBPQ96DY7 904 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 KLHL8Q9P2G9 620 aaPredicted RBP16.63■□□□□ 0.25
GNE-202ENST00000396594 APOA4P06727 396 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 ACAD11Q709F0 780 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 THNSL1Q8IYQ7 743 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 OR6J1Q8NGC5 347 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms