RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ZNF558Q96NG5 402 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 JPH2Q9BR39 696 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 TLR9Q9NR96 1032 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 SH2B1Q9NRF2 756 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-205ENST00000394892 MIOSQ9NXC5 875 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 LZTS1Q9Y250 596 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 USP20Q9Y2K6 914 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 PCDHB6Q9Y5E3 794 aa9.87□□□□□ -0.83
ATG4A-205ENST00000394892 LOXHD1Q8IVV2 1947 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 PP2D1A8MPX8 630 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 F8W810 466 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 HOXA2O43364 376 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 USO1O60763 962 aaKnown RBP9.86□□□□□ -0.83
ATG4A-205ENST00000394892 DKC1O60832 514 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATG4A-205ENST00000394892 GALTP07902 379 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 OR52Z1P0C646 297 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 SLC11A1P49279 550 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 PTPN5P54829 565 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 HMGN5P82970 282 aaKnown RBP9.86□□□□□ -0.83
ATG4A-205ENST00000394892 COASYQ13057 564 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 TRIM29Q14134 588 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 NOMO2Q5JPE7 1267 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 TTC38Q5R3I4 469 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 SYCE2Q6PIF2 218 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 MAEAQ7L5Y9 396 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 OTUD6AQ7L8S5 288 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 RNF135Q8IUD6 432 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 SMRP1Q8NCR6 262 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 GSTCDQ8NEC7 633 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 EDAQ92838 391 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 MTRQ99707 1265 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 POLR3CQ9BUI4 534 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-205ENST00000394892 INO80BQ9C086 356 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-205ENST00000394892 POLR3FQ9H1D9 316 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-205ENST00000394892 S1PR5Q9H228 398 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 CXCL16Q9H2A7 254 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 TLE6Q9H808 572 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 DACT1Q9NYF0 836 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 SPG21Q9NZD8 308 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 MUTYHQ9UIF7 546 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 HES2Q9Y543 173 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 C5orf42Q9H799 3197 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 MUC6Q6W4X9 2439 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 KIAA1671Q9BY89 1806 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 PIEZO1Q92508 2521 aa9.86□□□□□ -0.83
ATG4A-205ENST00000394892 RALGAPA2Q2PPJ7 1873 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 NLRC5Q86WI3 1866 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 C2orf71A6NGG8 1288 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 INPPL1O15357 1258 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 ASAP2O43150 1006 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 GAS2O43903 313 aaKnown RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 EIF5BO60841 1220 aaKnown RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 DGAT1O75907 488 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 EFEMP2O95967 443 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 XRCC6P12956 609 aaKnown RBP eCLIP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 ARF4P18085 180 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 RPA1P27694 616 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 POU5F1BQ06416 359 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 RABEP1Q15276 862 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 KANK3Q6NY19 840 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 TMEM184AQ6ZMB5 413 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 KCNK18Q7Z418 384 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 MRPL43Q8N983 215 aaKnown RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 MICAL1Q8TDZ2 1067 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 TCP11Q8WWU5 503 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 SUSD6Q92537 303 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 PBXIP1Q96AQ6 731 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 IGSF21Q96ID5 467 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 TCF25Q9BQ70 676 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 MMTAG2Q9BU76 263 aaKnown RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 ZBP1Q9H171 429 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 IRF2BPLQ9H1B7 796 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 TUFT1Q9NNX1 390 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 AAASQ9NRG9 546 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 DBR1Q9UK59 544 aaKnown RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 INPP5FQ9Y2H2 1132 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 USP15Q9Y4E8 981 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 IPPQ9Y573 584 aa9.85□□□□□ -0.83
ATG4A-205ENST00000394892 FNDC1Q4ZHG4 1894 aaPredicted RBP9.85□□□□□ -0.83
ATG4A-205ENST00000394892 WDR81Q562E7 1941 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 FSD2A1L4K1 749 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 LILRB3O75022 631 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 CLASP2O75122 1294 aaKnown RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 ZC3H11AO75152 810 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 NCLP19338 710 aaKnown RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 IGFBP6P24592 240 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 CDC25AP30304 524 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 TRAPPC10P48553 1259 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 RAB27AP51159 221 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 PTGDRQ13258 359 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 MXD4Q14582 209 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 SAFBQ15424 915 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 CDCA2Q69YH5 1023 aaPredicted RBP9.84□□□□□ -0.83
ATG4A-205ENST00000394892 GLB1LQ6UWU2 654 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 TRIM67Q6ZTA4 783 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 TAS1R1Q7RTX1 841 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 BMP8AQ7Z5Y6 402 aa9.84□□□□□ -0.83
ATG4A-205ENST00000394892 EXOC8Q8IYI6 725 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms