RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 CYP27A1Q02318 531 aa10.52□□□□□ -0.72
TRERF1-204ENST00000372922 RAB42Q8N4Z0 105 aa10.52□□□□□ -0.72
TRERF1-204ENST00000372922 IP6K2Q9UHH9 426 aa10.52□□□□□ -0.72
TRERF1-204ENST00000372922 MAP3K4Q9Y6R4 1608 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 MAPK13O15264 365 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 FGGP02679 453 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 STAT3P40763 770 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 PPP4R4Q6NUP7 873 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 CC2D1AQ6P1N0 951 aaPredicted RBP10.52□□□□□ -0.73
TRERF1-204ENST00000372922 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 NCLNQ969V3 563 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 ADAMTS1Q9UHI8 967 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 CPDO75976 1380 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 NBPF26B4DH59 902 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 DDX5P17844 614 aaKnown RBP10.52□□□□□ -0.73
TRERF1-204ENST00000372922 DEUP1Q05D60 604 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 ACAD11Q709F0 780 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 NBPF15Q8N660 670 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 CENPKQ9BS16 269 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 CCDC151A5D8V7 595 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 KRT7P08729 469 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 NECTIN1Q15223 517 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 KNOP1Q1ED39 458 aaKnown RBP10.52□□□□□ -0.73
TRERF1-204ENST00000372922 FSCBQ5H9T9 825 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 KRT80Q6KB66 452 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 TRIM72Q6ZMU5 477 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 ENOSF1Q7L5Y1 443 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
TRERF1-204ENST00000372922 TRIM54Q9BYV2 358 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 UTP6Q9NYH9 597 aaKnown RBP10.52□□□□□ -0.73
TRERF1-204ENST00000372922 L3MBTL1Q9Y468 752 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 POTEMA6NI47 508 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 PYGBP11216 843 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 OR6J1Q8NGC5 347 aa10.52□□□□□ -0.73
TRERF1-204ENST00000372922 RPAP3Q9H6T3 665 aaPredicted RBP10.52□□□□□ -0.73
TRERF1-204ENST00000372922 DDX56Q9NY93 547 aaKnown RBP10.52□□□□□ -0.73
TRERF1-204ENST00000372922 TRAPPC3O43617 180 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 PDHA1P08559 390 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 GNA15P30679 374 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 COASYQ13057 564 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 NNTQ13423 1086 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 CAPRIN1Q14444 709 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 SF3B3Q15393 1217 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 FAM133BQ5BKY9 247 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 HABP4Q5JVS0 413 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 ICE2Q659A1 982 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 ADGRF4Q8IZF3 695 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 SH3KBP1Q96B97 665 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 AIFM3Q96NN9 605 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 PRDM5Q9NQX1 630 aaPredicted RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 H3BRJ5 948 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 KCNJ6P48051 423 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 COPS2P61201 443 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 SPARCL1Q14515 664 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 TRIM60Q495X7 471 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 BTBD8Q5XKL5 378 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 TRIM59Q8IWR1 403 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 KLHL29Q96CT2 875 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 FAM217BQ9NTX9 383 aaPredicted RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 NOVA2Q9UNW9 492 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 NEDD4P46934 1319 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 F5H6K3 240 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 TNPO2O14787 897 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 MRPS15P82914 257 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 KLRC3Q07444 240 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 KLHL38Q2WGJ6 581 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 ASZ1Q8WWH4 475 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 POLR3CQ9BUI4 534 aaPredicted RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 NEUROG2Q9H2A3 272 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 PYCARDQ9ULZ3 195 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 FAM95CA0A1B0GW59 222 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 KBTBD13C9JR72 458 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 ACSL3O95573 720 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 HADHAP40939 763 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 HEATR6Q6AI08 1181 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 KIF12Q96FN5 646 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 MRPL40Q9NQ50 206 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 DDX28Q9NUL7 540 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 TRIM33Q9UPN9 1127 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 A8MXQ7 604 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 NEK2P51955 445 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 TAP1Q03518 808 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 NME3Q13232 169 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 RBM46Q8TBY0 533 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 CEP19Q96LK0 163 aa10.51□□□□□ -0.73
TRERF1-204ENST00000372922 SARS2Q9NP81 518 aaKnown RBP10.51□□□□□ -0.73
TRERF1-204ENST00000372922 MYO1DO94832 1006 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 CYBBP04839 570 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 NR1H3Q13133 447 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 DCAF4L1Q3SXM0 396 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 TRMT10CQ7L0Y3 403 aaKnown RBP10.5□□□□□ -0.73
TRERF1-204ENST00000372922 GPD1LQ8N335 351 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 SH3GL2Q99962 352 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 MTA3Q9BTC8 594 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 KIFC3Q9BVG8 833 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 KATNAL1Q9BW62 490 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 DCP1AQ9NPI6 582 aaPredicted RBP10.5□□□□□ -0.73
TRERF1-204ENST00000372922 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
TRERF1-204ENST00000372922 EFNA5P52803 228 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms