RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 THNSL2Q86YJ6 484 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CEP57L1Q8IYX8 460 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 MAGEB6Q8N7X4 407 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CCHCR1Q8TD31 782 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 NSUN6Q8TEA1 469 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 LPAR1Q92633 364 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 GMCL1Q96IK5 515 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 RADILQ96JH8 1075 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 C7orf25Q9BPX7 421 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 YIPF4Q9BSR8 244 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 TRIM55Q9BYV6 548 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 VIPAS39Q9H9C1 493 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 NLRC4Q9NPP4 1024 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 TMCO1Q9UM00 188 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 MAPK8IP1Q9UQF2 711 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 DNMT3AQ9Y6K1 912 aaPredicted RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 SLC4A4Q9Y6R1 1079 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 PDS5AQ29RF7 1337 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 ATRNL1Q5VV63 1379 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF189O75820 626 aaPredicted RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 LUC7L3O95232 432 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 TGDSO95455 350 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 DNTTP04053 509 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 TPD52P55327 224 aaPredicted RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 C21orf58P58505 322 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 GNAI1P63096 354 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 AIMP1Q12904 312 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 PPIGQ13427 754 aaKnown RBP eCLIP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CNGA3Q16281 694 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC122Q5T0U0 273 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 MIS18BP1Q6P0N0 1132 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 OLFM4Q6UX06 510 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CRELD2Q6UXH1 353 aaPredicted RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 ENOSF1Q7L5Y1 443 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 SESTD1Q86VW0 696 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC144CPQ8IYA2 1237 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CLP1Q92989 425 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 EPSTI1Q96J88 318 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 RUFY1Q96T51 708 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 TRIM4Q9C037 500 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 PRM3Q9NNZ6 103 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 KCNQ5Q9NR82 932 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 DNAAF2Q9NVR5 837 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 ZFATQ9P243 1243 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 NFKBIL1Q9UBC1 381 aaPredicted RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 DDX20Q9UHI6 824 aaKnown RBP5.5□□□□□ -1.53
UBE3D-202ENST00000369746 DNAI1Q9UI46 699 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 ZNF180Q9UJW8 692 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 EDARQ9UNE0 448 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 PHF24Q9UPV7 400 aa5.5□□□□□ -1.53
UBE3D-202ENST00000369746 POTEB3A0JP26 581 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 C6orf229H3BNL8 230 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SMIM22K7EJ46 135 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 ZEB2O60315 1214 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PLOD3O60568 738 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 TADA3O75528 432 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 RASSF9O75901 435 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 GLRX3O76003 335 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 RNF8O76064 485 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 EGFRP00533 1210 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 MT-ND3P03897 115 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 TRIM27P14373 513 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 MZF1P28698 734 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CD83Q01151 205 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 NAA30Q147X3 362 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 MTFR1Q15390 333 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 Q4G0T1 1027 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 ARSHQ5FYA8 562 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 POTEBQ6S5H4 581 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 BNC2Q6ZN30 1099 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 HDXQ7Z353 690 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 RIC3Q7Z5B4 369 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PLA2G4DQ86XP0 818 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CCDC116Q8IYX3 515 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CELF2-AS1Q8N7Q2 184 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 IL17RDQ8NFM7 739 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 PHOSPHO2Q8TCD6 241 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 NUP133Q8WUM0 1156 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SPDL1Q96EA4 605 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 COG8Q96MW5 612 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 JAKMIP1Q96N16 626 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 ELAC2Q9BQ52 826 aaKnown RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 GBP3Q9H0R5 595 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 OSBPL3Q9H4L5 887 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 ZWILCHQ9H900 591 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 ACTR5Q9H9F9 607 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 HYPKQ9NX55 129 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 JAG2Q9Y219 1238 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 TTLL3Q9Y4R7 772 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 FAM169AQ9Y6X4 670 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 CACNA1FO60840 1977 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 GOLGA6L10A0A0M3HER8 536 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 C19orf67A6NJJ6 358 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 LACTBL1A8MY62 500 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 MGRN1O60291 552 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SKAP2O75563 359 aaPredicted RBP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 SMNDC1O75940 238 aaKnown RBP eCLIP5.49□□□□□ -1.53
UBE3D-202ENST00000369746 UFL1O94874 794 aa5.49□□□□□ -1.53
UBE3D-202ENST00000369746 STAMBPO95630 424 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms