RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 RNF149Q8NC42 400 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 HAS1Q92839 578 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 DYDC2Q96IM9 177 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 FAM193BQ96PV7 902 aaPredicted RBP9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 MTRQ99707 1265 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 PRRX2Q99811 253 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 ADAM7Q9H2U9 754 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 ZSWIM4Q9H7M6 989 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 RSAD1Q9HA92 442 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 GJB4Q9NTQ9 266 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 RGL1Q9NZL6 768 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 WRAP73Q9P2S5 460 aaPredicted RBP9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 DNAJB4Q9UDY4 337 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 STK39Q9UEW8 545 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 CDH22Q9UJ99 828 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 DENND4AQ7Z401 1863 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 SSBP05455 408 aaKnown RBP eCLIP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 GALTP07902 379 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 WEE2P0C1S8 567 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 CTSAP10619 480 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 EPCAMP16422 314 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 AK2P54819 239 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 PTPN5P54829 565 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 ANAPC15P60006 121 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 NCBP1Q09161 790 aaKnown RBP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 NR5A1Q13285 461 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 MTMR3Q13615 1198 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 TRIM29Q14134 588 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 TFDP1Q14186 410 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 MXD4Q14582 209 aaPredicted RBP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 AGMOQ6ZNB7 445 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 FERMT3Q86UX7 667 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 CABP7Q86V35 215 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 PPFIBP1Q86W92 1011 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 ZNF280BQ86YH2 543 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 TPH2Q8IWU9 490 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 C12orf76Q8N812 135 aaPredicted RBP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 TDRD5Q8NAT2 981 aaKnown RBP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 BCL7CQ8WUZ0 217 aaPredicted RBP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 MINDY3Q9H8M7 445 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 KANSL3Q9P2N6 904 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 DBR1Q9UK59 544 aaKnown RBP9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 IRAK3Q9Y616 596 aa9.12□□□□□ -0.95
RNU4-59P-201ENST00000364447 TRIOO75962 3097 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 FAM205CA6NFA0 338 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 C2CD4DB7Z1M9 353 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 INO80B-WBP1J3KQ70 363 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 NEMFO60524 1076 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 CTDNEP1O95476 244 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 POMCP01189 267 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 ALDH2P05091 517 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 ITGA4P13612 1032 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 NCLP19338 710 aaKnown RBP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 KLRC2P26717 231 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 AXLP30530 894 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 HOXA11P31270 313 aaPredicted RBP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 FOSBP53539 338 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 SPIRE1Q08AE8 756 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 PCBP1Q15365 356 aaKnown RBP eCLIP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 PTPN14Q15678 1187 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 CALCRLQ16602 461 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 EARS2Q5JPH6 523 aaKnown RBP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 ATAT1Q5SQI0 421 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 KIAA1841Q6NSI8 718 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 NOTUMQ6P988 496 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 MRPL10Q7Z7H8 261 aaKnown RBP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 UBALD2Q8IYN6 164 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 NECAB1Q8N987 351 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 KREMEN2Q8NCW0 462 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 CNNM3Q8NE01 707 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 PRSS33Q8NF86 280 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 ASIC4Q96FT7 647 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 EIF2AK1Q9BQI3 630 aaKnown RBP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 EMILIN2Q9BXX0 1053 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 SFXN1Q9H9B4 322 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 UBN1Q9NPG3 1134 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 MRPL17Q9NRX2 175 aaKnown RBP9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 PCDHA12Q9UN75 941 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 SORCS3Q9UPU3 1222 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 FAN1Q9Y2M0 1017 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 C2orf16Q68DN1 1984 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 MYO10Q9HD67 2058 aa9.11□□□□□ -0.95
RNU4-59P-201ENST00000364447 C2CD2LO14523 706 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 NRP1O14786 923 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 ZBTB39O15060 712 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 B4GALT3O60512 393 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 TSPAN1O60635 241 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 NR1I2O75469 434 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 DGAT1O75907 488 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 DDHD2O94830 711 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 SLITRK3O94933 977 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 URODP06132 367 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 MLH1P40692 756 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 OR1G1P47890 313 aa9.1□□□□□ -0.95
RNU4-59P-201ENST00000364447 UBXN11Q5T124 520 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms