RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 FRMD4BQ9Y2L6 1034 aa16.49■□□□□ 0.23
PTBP1-203ENST00000356948 FERP16591 822 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 PADI6Q6TGC4 694 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 LDHDQ86WU2 507 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 RPUSD2Q8IZ73 545 aaKnown RBP16.48■□□□□ 0.23
PTBP1-203ENST00000356948 FAM118BQ9BPY3 351 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 GLT8D2Q9H1C3 349 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 DNAJC17Q9NVM6 304 aaKnown RBP16.48■□□□□ 0.23
PTBP1-203ENST00000356948 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 QSER1Q2KHR3 1735 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-203ENST00000356948 MAP2K1Q02750 393 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-203ENST00000356948 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 SEMA4DQ92854 862 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 PNMA2Q9UL42 364 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 SLC16A4O15374 487 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 ATP9AO75110 1047 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 KRT71Q3SY84 523 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 SCARA3Q6AZY7 606 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 BTNL9Q6UXG8 535 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 KCNH7Q9NS40 1196 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 CTTNBP2NLQ9P2B4 639 aa16.48■□□□□ 0.23
PTBP1-203ENST00000356948 ARHGEF35A5YM69 484 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 CYP26A1O43174 497 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 APBA3O96018 575 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 PPP2R5CQ13362 524 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 CCDC38Q502W7 563 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 HS2ST1Q7LGA3 356 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 VPS36Q86VN1 386 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 RFFLQ8WZ73 363 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 CCDC114Q96M63 670 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 SLC12A6Q9UHW9 1150 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 ADRB2P07550 413 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 IFI35P80217 286 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-203ENST00000356948 NOP9Q86U38 636 aaKnown RBP16.47■□□□□ 0.23
PTBP1-203ENST00000356948 RUBCNQ92622 972 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 PI4K2AQ9BTU6 479 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 FRMPD4Q14CM0 1322 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 GOLGA6L7A0A1B0GV03 622 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 PPIP5K2O43314 1243 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 MMEP08473 750 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 FGFR4P22455 802 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 CLNS1AP54105 237 aaKnown RBP16.47■□□□□ 0.23
PTBP1-203ENST00000356948 CD302Q8IX05 232 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 RNF25Q96BH1 459 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-203ENST00000356948 PWWP2AQ96N64 755 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 SERPINA10Q9UK55 444 aa16.47■□□□□ 0.23
PTBP1-203ENST00000356948 TRPC5Q9UL62 973 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-203ENST00000356948 PIK3CDO00329 1044 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 PYGMP11217 842 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 DR1Q01658 176 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 SP4Q02446 784 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 LMBRD2Q68DH5 695 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-203ENST00000356948 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 AGPAT1Q99943 283 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 SEMA4AQ9H3S1 761 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 DNAH12Q6ZR08 3092 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 BHMG1C9JSJ3 638 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-203ENST00000356948 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
PTBP1-203ENST00000356948 EIF2AK2P19525 551 aaKnown RBP16.46■□□□□ 0.23
PTBP1-203ENST00000356948 COMTP21964 271 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
PTBP1-203ENST00000356948 CEP350Q5VT06 3117 aa16.46■□□□□ 0.22
PTBP1-203ENST00000356948 CHRNB2P17787 502 aa16.46■□□□□ 0.22
PTBP1-203ENST00000356948 ZNF131P52739 623 aa16.46■□□□□ 0.22
PTBP1-203ENST00000356948 PEX3P56589 373 aa16.46■□□□□ 0.22
PTBP1-203ENST00000356948 WNK4Q96J92 1243 aa16.46■□□□□ 0.22
PTBP1-203ENST00000356948 KREMEN1Q96MU8 473 aa16.46■□□□□ 0.22
PTBP1-203ENST00000356948 TUFT1Q9NNX1 390 aa16.46■□□□□ 0.22
PTBP1-203ENST00000356948 SKAP2O75563 359 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-203ENST00000356948 TMEM253P0C7T8 217 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 VCAM1P19320 739 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 MRPS9P82933 396 aaKnown RBP16.45■□□□□ 0.22
PTBP1-203ENST00000356948 FAM182AQ5T1J6 154 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 ZDHHC24Q6UX98 284 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 PPM1KQ8N3J5 372 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 PRELID2Q8N945 189 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 RAPGEF5Q92565 580 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 NACC1Q96RE7 527 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 EIF4E1BA6NMX2 242 aaKnown RBP16.45■□□□□ 0.22
PTBP1-203ENST00000356948 GAP43P17677 238 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 PRUNE1Q86TP1 453 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 ZNF277Q9NRM2 450 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-203ENST00000356948 ZDHHC18Q9NUE0 388 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 DDX20Q9UHI6 824 aaKnown RBP16.45■□□□□ 0.22
PTBP1-203ENST00000356948 ODF2LQ9ULJ1 636 aa16.45■□□□□ 0.22
PTBP1-203ENST00000356948 UTP11Q9Y3A2 253 aaKnown RBP16.45■□□□□ 0.22
PTBP1-203ENST00000356948 O00370 1275 aa16.44■□□□□ 0.22
PTBP1-203ENST00000356948 EIF3DO15371 548 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTBP1-203ENST00000356948 DHX15O43143 795 aaKnown RBP16.44■□□□□ 0.22
PTBP1-203ENST00000356948 BRD2P25440 801 aaKnown RBP16.44■□□□□ 0.22
PTBP1-203ENST00000356948 RPL21P46778 160 aaKnown RBP16.44■□□□□ 0.22
PTBP1-203ENST00000356948 SNX1Q13596 522 aa16.44■□□□□ 0.22
PTBP1-203ENST00000356948 CUL1Q13616 776 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms