RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SRP68Q9UHB9 627 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 SYNGAP1Q96PV0 1343 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 C5orf58C9J3I9 102 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 COPEO14579 308 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 KCNQ3O43525 872 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 TRPA1O75762 1119 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 HSPA1AP0DMV8 641 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 HSPA1BP0DMV9 641 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 MAP2K2P36507 400 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CCT5P48643 541 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ASAP3Q8TDY4 903 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CHAMP1Q96JM3 812 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PUS3Q9BZE2 481 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 RAVER2Q9HCJ3 691 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 GIMAP4Q9NUV9 329 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PCDHA5Q9Y5H7 936 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 MOCS2O96007 188 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PSMA3P25788 255 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 GRIK1P39086 918 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 MDM2Q00987 491 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 NAALADL2Q58DX5 795 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 HEATR6Q6AI08 1181 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 VSTM4Q8IW00 320 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PPHLN1Q8NEY8 458 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PAWRQ96IZ0 340 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 STN1Q9H668 368 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 RGL1Q9NZL6 768 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CDC23Q9UJX2 597 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ARHGEF40Q8TER5 1519 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CDK17Q00537 523 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 GRIN1Q05586 938 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ORC2Q13416 577 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 SNAPC2Q13487 334 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 TAF1CQ15572 869 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 AARS2Q5JTZ9 985 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CNPY4Q8N129 248 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 RMDN2Q96LZ7 410 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 NRBP1Q9UHY1 535 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 AFF2P51816 1311 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 KRT87PA6NCN2 255 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 VGLL3A8MV65 326 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 MIF4GDA9UHW6 222 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 HLA-DPA1P20036 260 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PEX3P56589 373 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CAV1Q03135 178 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 RESTQ13127 1097 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 LAMB3Q13751 1172 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 KRT72Q14CN4 511 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 MORF4L2Q15014 288 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 TKFCQ3LXA3 575 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 TMEM270Q6UE05 265 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 OOSP2Q86WS3 158 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 SYNE4Q8N205 404 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 STKLD1Q8NE28 680 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 AAASQ9NRG9 546 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ADAM22Q9P0K1 906 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 HEG1Q9ULI3 1381 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 NBPF26B4DH59 902 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 LMNAP02545 664 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CLTAP09496 248 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 IFNAR2P48551 515 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 MAP3K10Q02779 954 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ADCY2Q08462 1091 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PHKG1Q16816 387 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 E4F1Q66K89 784 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 HAUS6Q7Z4H7 955 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PODNQ7Z5L7 613 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 RMDN1Q96DB5 314 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP44Q9H0E7 712 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 EML4Q9HC35 981 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 MAN1C1Q9NR34 630 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ZNF335Q9H4Z2 1342 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L15C9J2P7 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L13C9JLJ4 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L11C9JVI0 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L18D6R9N7 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L22D6RA61 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L17D6RBQ6 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L19D6RCP7 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L20D6RJB6 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 STXBP3O00186 592 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 KCNA2P16389 499 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 CCNE1P24864 410 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 EFNA5P52803 228 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ROR1Q01973 937 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 RBL2Q08999 1139 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 USP17L24Q0WX57 530 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 TMCO5AQ8N6Q1 288 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 OR6J1Q8NGC5 347 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 NHEJ1Q9H9Q4 299 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 G3BP2Q9UN86 482 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 ZCCHC11Q5TAX3 1644 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 EIF4A3P38919 411 aaKnown RBP5.88□□□□□ -1.47
PTPRD-202ENST00000356435 STAT3P40763 770 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 AP1B1Q10567 949 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 XXYLT1Q8NBI6 393 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 TNIP3Q96KP6 325 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms