RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 PIGSQ96S52 555 aa16.08■□□□□ 0.16
TRAF3-202ENST00000351691 SEMA4AQ9H3S1 761 aa16.08■□□□□ 0.16
TRAF3-202ENST00000351691 MTMR7Q9Y216 660 aa16.08■□□□□ 0.16
TRAF3-202ENST00000351691 GGPS1O95749 300 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 ALAS1P13196 640 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 LRRC41Q15345 812 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 GNPTABQ3T906 1256 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 SPDYAQ5MJ70 313 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 MFSD14BQ5SR56 506 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 NUGGCQ68CJ6 796 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 FRMD5Q7Z6J6 570 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 SDCCAG8Q86SQ7 713 aaPredicted RBP16.07■□□□□ 0.16
TRAF3-202ENST00000351691 ASAP3Q8TDY4 903 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 CTTNBP2NLQ9P2B4 639 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 NKX1-2Q9UD57 310 aaPredicted RBP16.07■□□□□ 0.16
TRAF3-202ENST00000351691 SNX24Q9Y343 169 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 NR2E1Q9Y466 385 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 LRRC37AA6NMS7 1700 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 MROH7Q68CQ1 1323 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 PITPNM2Q9BZ72 1349 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
TRAF3-202ENST00000351691 GSTA2P09210 222 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 TMEM253P0C7T8 217 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 SNHG28P0DPA3 235 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 ADCY7P51828 1080 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 RAD23BP54727 409 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 JAM2P57087 298 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 DYNC1I2Q13409 638 aaKnown RBP16.07■□□□□ 0.16
TRAF3-202ENST00000351691 ADAM9Q13443 819 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 SNX1Q13596 522 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 ENOX2Q16206 610 aaKnown RBP16.07■□□□□ 0.16
TRAF3-202ENST00000351691 KCNV2Q8TDN2 545 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 RFFLQ8WZ73 363 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 MAGEB18Q96M61 343 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 KCTD10Q9H3F6 313 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 ETNK1Q9HBU6 452 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 GGT7Q9UJ14 662 aa16.07■□□□□ 0.16
TRAF3-202ENST00000351691 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 APBA3O96018 575 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 MTFR1Q15390 333 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 DCAF12L1Q5VU92 463 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 VSTM1Q6UX27 236 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 CYFIP1Q7L576 1253 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SESTD1Q86VW0 696 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 GPR101Q96P66 508 aaPredicted RBP16.06■□□□□ 0.16
TRAF3-202ENST00000351691 MTMR4Q9NYA4 1195 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 PCDHA3Q9Y5H8 950 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 TMEM120BA0PK00 339 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SPDYE5A6NIY4 337 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SMIM23A6NLE4 172 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 DDX3XO00571 662 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAF3-202ENST00000351691 CETN3O15182 167 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SLC26A4O43511 780 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SERPINB2P05120 415 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
TRAF3-202ENST00000351691 GABPAQ06546 454 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SF3A3Q12874 501 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAF3-202ENST00000351691 CALCRLQ16602 461 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 KRT79Q5XKE5 535 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 TRIM68Q6AZZ1 485 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SLC30A5Q8TAD4 765 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 ART4Q93070 314 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 IFT43Q96FT9 208 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 GORASP1Q9BQQ3 440 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SYT15Q9BQS2 421 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 TRIM33Q9UPN9 1127 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 C2CD2Q9Y426 696 aa16.06■□□□□ 0.16
TRAF3-202ENST00000351691 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 TXKP42681 527 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 RPL21P46778 160 aaKnown RBP16.05■□□□□ 0.16
TRAF3-202ENST00000351691 LAMB3Q13751 1172 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 CCDC65Q8IXS2 484 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 RBBP8NLQ8NC74 664 aaPredicted RBP16.05■□□□□ 0.16
TRAF3-202ENST00000351691 ARHGEF2Q92974 986 aaKnown RBP16.05■□□□□ 0.16
TRAF3-202ENST00000351691 RMDN2Q96LZ7 410 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 NAP1L4Q99733 375 aaKnown RBP16.05■□□□□ 0.16
TRAF3-202ENST00000351691 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 ERVK-5Q9HDB9 667 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
TRAF3-202ENST00000351691 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
TRAF3-202ENST00000351691 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
TRAF3-202ENST00000351691 TCEA3O75764 348 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 RNF8O76064 485 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 LMNB1P20700 586 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 CTNNA2P26232 953 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 PON1P27169 355 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 GALCP54803 685 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 CUL3Q13618 768 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 EXOC3L4Q17RC7 722 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 TBC1D25Q3MII6 688 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 TMEM154Q6P9G4 183 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 ECHDC2Q86YB7 292 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 RPUSD2Q8IZ73 545 aaKnown RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 ANKLE1Q8NAG6 615 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms