RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LINC00116Q8NCU8 138 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 MROH8Q9H579 483 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 ALKBH5Q6P6C2 394 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 GPC2Q8N158 579 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF512BQ96KM6 892 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 TCHHQ07283 1943 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 A0A087X0B3 334 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 PGRMC1O00264 195 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 NR1D1P20393 614 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 TACO1Q9BSH4 297 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 ENTPD7Q9NQZ7 604 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 DNAJC17Q9NVM6 304 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 FBXL21Q9UKT6 434 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 PIN4Q9Y237 131 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 PLAAQ9Y263 795 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 SYNGAP1Q96PV0 1343 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 SLIT1O75093 1534 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 BAZ2BQ9UIF8 2168 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 ORC4O43929 436 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 INTS8Q75QN2 995 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 COL23A1Q86Y22 540 aaPredicted RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 DCP1BQ8IZD4 617 aaKnown RBP11.64□□□□□ -0.55
CLCN6-202ENST00000346436 FAM20AQ96MK3 541 aa11.64□□□□□ -0.55
CLCN6-202ENST00000346436 A6NNZ2 444 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 H7C0C1 242 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 ATP5OP48047 213 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 TUBB8Q3ZCM7 444 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 TRIM65Q6PJ69 517 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 SAMD7Q7Z3H4 446 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 SFR1Q86XK3 245 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 SH2D3CQ8N5H7 860 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 IL17RAQ96F46 866 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 FHDC1Q9C0D6 1143 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 SLC9A2Q9UBY0 812 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 PCDHB12Q9Y5F1 795 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 PPFIA4O75335 1185 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 IGFBP4P22692 258 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 KPNA2P52292 529 aaKnown RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 ACCSLQ4AC99 568 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 FYB2Q5VWT5 728 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 MAGOHBQ96A72 148 aaKnown RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 SKA1Q96BD8 255 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 MRPL47Q9HD33 250 aaKnown RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 FAM217BQ9NTX9 383 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 TROAPQ12815 778 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 ITPK1Q13572 414 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 CYP4A22Q5TCH4 519 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 LDHDQ86WU2 507 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 GAS2L1Q99501 681 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 RNF208Q9H0X6 261 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 CTSHP09668 335 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 STAT5BP51692 787 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 PSMC5P62195 406 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 TRIP13Q15645 432 aaPredicted RBP11.63□□□□□ -0.55
CLCN6-202ENST00000346436 MTA3Q9BTC8 594 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 TMEM39AQ9NV64 488 aa11.63□□□□□ -0.55
CLCN6-202ENST00000346436 MAP3K13O43283 966 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 GSTA1P08263 222 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 GSTA2P09210 222 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 DDX53Q86TM3 631 aaKnown RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SPATA4Q8NEY3 305 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 STAP1Q9ULZ2 295 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 TRPA1O75762 1119 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 LMNB2Q03252 620 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SETDB1Q15047 1291 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SPATA2LQ8IUW3 424 aaPredicted RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 COG1Q8WTW3 980 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SRPK1Q96SB4 655 aaKnown RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 DDX47Q9H0S4 455 aaKnown RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 ZNF446Q9NWS9 450 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 C17orf102A2RUQ5 167 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 I3L4J1 428 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 ASAP2O43150 1006 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 NTSR2O95665 410 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 IFNB1P01574 187 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 P4HBP07237 508 aaKnown RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 ADCY8P40145 1251 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 GPC3P51654 580 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 AP3M2P53677 418 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 BBOF1Q8ND07 529 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 CCNYQ8ND76 341 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 SEPT1Q8WYJ6 367 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 STN1Q9H668 368 aaKnown RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 BZW2Q9Y6E2 419 aaKnown RBP11.62□□□□□ -0.55
CLCN6-202ENST00000346436 TCRBV5S4A2TA0A5A2 114 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 FRMD3A2A2Y4 597 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 GOLGA8IPA6NC78 632 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 GOLGA8JA6NMD2 632 aa11.62□□□□□ -0.55
CLCN6-202ENST00000346436 MYO1FO00160 1098 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms