RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 C2CD3Q4AC94 2353 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 ZNF532Q9HCE3 1301 aa13.09□□□□□ -0.31
ATXN3-201ENST00000340660 TCRBV5S4A2TA0A5A2 114 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 MGEA5O60502 916 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 TTLL1O95922 423 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 MPLP40238 635 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 CCR10P46092 362 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 CELF3Q5SZQ8 465 aaKnown RBP13.08□□□□□ -0.32
ATXN3-201ENST00000340660 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
ATXN3-201ENST00000340660 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 CHCHD4Q8N4Q1 142 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 TMEM87AQ8NBN3 555 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 CMASQ8NFW8 434 aaPredicted RBP13.08□□□□□ -0.32
ATXN3-201ENST00000340660 IRAK3Q9Y616 596 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 CACNA1EQ15878 2313 aa13.08□□□□□ -0.32
ATXN3-201ENST00000340660 HOXC13P31276 330 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 RNF144AP50876 292 aaPredicted RBP13.07□□□□□ -0.32
ATXN3-201ENST00000340660 CLCN4P51793 760 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 SLC9C2Q5TAH2 1124 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 GET4Q7L5D6 327 aaPredicted RBP13.07□□□□□ -0.32
ATXN3-201ENST00000340660 LYSMD3Q7Z3D4 306 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 DNAJB3Q8WWF6 145 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 VPS45Q9NRW7 570 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
ATXN3-201ENST00000340660 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
ATXN3-201ENST00000340660 URB1O60287 2271 aaKnown RBP13.06□□□□□ -0.32
ATXN3-201ENST00000340660 SPAARA0A1B0GVQ0 90 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 K7ESF4 209 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 GGPS1O95749 300 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 SCTRP47872 440 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 STXBP2Q15833 593 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 RNFT1Q5M7Z0 435 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 TAF2Q6P1X5 1199 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 ZNF852Q6ZMS4 543 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 VWA5B2Q8N398 1253 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 LSM14AQ8ND56 463 aaKnown RBP13.06□□□□□ -0.32
ATXN3-201ENST00000340660 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
ATXN3-201ENST00000340660 PTPRQQ9UMZ3 2332 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 CCDC195A0A1B0GUA6 201 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 WISP1O95388 367 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 CXCL12P48061 93 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 MRPS6P82932 125 aaKnown RBP13.05□□□□□ -0.32
ATXN3-201ENST00000340660 SP2Q02086 613 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 PAK2Q13177 524 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 MTX1Q13505 466 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 GAS6Q14393 721 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 COLEC12Q5KU26 742 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 KBTBD6Q86V97 674 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 TRIM50Q86XT4 487 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 IER2Q9BTL4 223 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 RHOBTB2Q9BYZ6 727 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATXN3-201ENST00000340660 COL20A1Q9P218 1284 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 PCDHGA5Q9Y5G8 931 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 SQORQ9Y6N5 450 aa13.05□□□□□ -0.32
ATXN3-201ENST00000340660 ATMQ13315 3056 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 MBD4O95243 580 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 CTSAP10619 480 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 PFKPQ01813 784 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
ATXN3-201ENST00000340660 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 RSPH3Q86UC2 560 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
ATXN3-201ENST00000340660 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 ZNF707Q96C28 371 aaPredicted RBP13.04□□□□□ -0.32
ATXN3-201ENST00000340660 MEIS3Q99687 375 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 RNF19AQ9NV58 838 aa13.04□□□□□ -0.32
ATXN3-201ENST00000340660 NDRG2Q9UN36 371 aaKnown RBP13.04□□□□□ -0.32
ATXN3-201ENST00000340660 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
ATXN3-201ENST00000340660 CDC14CA4D256 554 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 C9IYK1 514 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 CDX4O14627 284 aaPredicted RBP13.03□□□□□ -0.32
ATXN3-201ENST00000340660 UBA1P22314 1058 aaKnown RBP13.03□□□□□ -0.32
ATXN3-201ENST00000340660 SLC16A2P36021 539 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 RIPPLY3P57055 190 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
ATXN3-201ENST00000340660 CFHR1Q03591 330 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 GIT2Q14161 759 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 BMS1Q14692 1282 aaKnown RBP13.03□□□□□ -0.32
ATXN3-201ENST00000340660 TMEM266Q2M3C6 531 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
ATXN3-201ENST00000340660 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 MAN1C1Q9NR34 630 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 HEBP1Q9NRV9 189 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 IGSF9BQ9UPX0 1349 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
ATXN3-201ENST00000340660 A0A087WV48 116 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms