RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 C2orf40Q9H1Z8 148 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ITIH6Q6UXX5 1313 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 A0A1W2PQC6 194 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ZEB2O60315 1214 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 EDN1P05305 212 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GRK4P32298 578 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KIAA0319LQ8IZA0 1049 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 XXYLT1Q8NBI6 393 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 BORCS6Q96GS4 357 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MAP7D2Q96T17 732 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CCDC113Q9H0I3 377 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 HDAC6Q9UBN7 1215 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 DDX20Q9UHI6 824 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SCN10AQ9Y5Y9 1956 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 HTTP42858 3142 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GOLGA8IPA6NC78 632 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GOLGA8JA6NMD2 632 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GSDMDP57764 484 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PTENP60484 403 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 DCAF17Q5H9S7 520 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TCERG1LQ5VWI1 586 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 C7orf31Q8N865 590 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SAAL1Q96ER3 474 aa16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDK5RAP3-201ENST00000338399 A0A087WZ62 844 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MBLAC1A4D2B0 266 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 INO80B-WBP1J3KQ70 363 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MSCO60682 206 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PIGRP01833 764 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PRKCBP05771 671 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 C1QTNF8P60827 252 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ZNF200P98182 395 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GOLGA8FQ08AF8 430 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GOLGA8DPQ0D2H9 430 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KCNH2Q12809 1159 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SYCP1Q15431 976 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MAPK6Q16659 721 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CCDC155Q8N6L0 562 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KLHDC9Q8NEP7 349 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CACTINQ8WUQ7 758 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CPLX3Q8WVH0 158 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ERGIC2Q96RQ1 377 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FDXACB1Q9BRP7 624 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 INO80BQ9C086 356 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FAM49AQ9H0Q0 323 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KCNF1Q9H3M0 494 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 IFT122Q9HBG6 1241 aa16.11■□□□□ 0.17
CDK5RAP3-201ENST00000338399 C17orf102A2RUQ5 167 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TTLL13PA6NNM8 815 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TREHO43280 583 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ASGR1P07306 291 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CYP2C9P11712 490 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GARTP22102 1010 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KLK7P49862 253 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ADAM17P78536 824 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 RBL2Q08999 1139 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 LRMPQ12912 555 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 KCNA10Q16322 511 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ZBTB45Q96K62 511 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PCMTD1Q96MG8 357 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MINDY3Q9H8M7 445 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 WBP1LQ9NX94 342 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.1■□□□□ 0.171e-7■■□□□ 13.3
CDK5RAP3-201ENST00000338399 AFPP02771 609 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PHKA2P46019 1235 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 NLRP11P59045 1033 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MBTD1Q05BQ5 628 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 PPP2R3AQ06190 1150 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 POU5F1BQ06416 359 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 NBPF20Q3BBV1 942 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CCDC150Q8NCX0 1101 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 NLRP7Q8WX94 980 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SLC35C1Q96A29 364 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MRPL4Q9BYD3 311 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 NFKBIZQ9BYH8 718 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 FZD8Q9H461 694 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 STYXL1Q9Y6J8 313 aa16.1■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SMIM35A0A1B0GVV1 85 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CSDE1O75534 798 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ADRB2P07550 413 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GNAT1P11488 350 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SFPQP23246 707 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 MATR3P43243 847 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 GPC3P51654 580 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 ADKP55263 362 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SNRNP35Q16560 246 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SLFN12LQ6IEE8 588 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CCSAPQ6IQ19 270 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 CBWD2Q8IUF1 395 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
CDK5RAP3-201ENST00000338399 SCLT1Q96NL6 688 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms