RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 VPS50Q96JG6 964 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 STRNO43815 780 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ABCD1P33897 745 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 RUNX1T1Q06455 604 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 PCDHA4Q9UN74 947 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 MDH1P40925 334 aaKnown RBP13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRIP4Q15650 581 aaPredicted RBP13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 KDELC2Q7Z4H8 507 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 FOXP1Q9H334 677 aaPredicted RBP13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 C1orf54Q8WWF1 131 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ASNA1O43681 348 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 AP1G2O75843 785 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 LAMC2Q13753 1193 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 NDUFA5Q16718 116 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 IFNEQ86WN2 208 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 COG1Q8WTW3 980 aa13.51□□□□□ -0.25
RAB11FIP1-202ENST00000330843 MYL1P05976 194 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 PAX7P23759 505 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ATP1A1P05023 1023 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SRGAP2CP0DJJ0 459 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ATP5JP18859 108 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SCNN1DP51172 638 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 DDB1Q16531 1140 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SARM1Q6SZW1 724 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 GANCQ8TET4 914 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 RNF139Q8WU17 664 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 A0A1W2PQ27 194 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 A0A1W2PQ64 194 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 A0A1W2PQD8 194 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRIM69Q86WT6 500 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 NUP85Q9BW27 656 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 IDI1Q13907 227 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRIP10Q15642 601 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 METTL23Q86XA0 190 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 GLMNQ92990 594 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TCP10L2B9ZVM9 353 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 H0YCG3 227 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CCDC188H7C350 402 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 IL12RB1P42701 662 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CCDC137Q6PK04 289 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TBCKQ8TEA7 893 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 DKK3Q9UBP4 350 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 MROH5Q6ZUA9 1318 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ANGPT2O15123 496 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 KCNA2P16389 499 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 BCAMP50895 628 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CERKLQ49MI3 558 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 EYA1Q99502 592 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SPRTNQ9H040 489 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ARL2BPQ9Y2Y0 163 aa13.5□□□□□ -0.25
RAB11FIP1-202ENST00000330843 KCTD21Q4G0X4 260 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SMNDC1O75940 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 MARK3P27448 753 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ZNF556Q9HAH1 456 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 POLR3EQ9NVU0 708 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 PCDHB6Q9Y5E3 794 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 PCDHA1Q9Y5I3 950 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 RNF103O00237 685 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 GUCA1CO95843 209 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CPA2P48052 419 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CENPAP49450 140 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TSSK1BQ9BXA7 367 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 EML4Q9HC35 981 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 AGRPO00253 132 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 IL2RBP14784 551 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 GTF2IP78347 998 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 PRPF39Q86UA1 669 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CAPSLQ8WWF8 208 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SNF8Q96H20 258 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 IGF2BP3O00425 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 CCND1P24385 295 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TARSP26639 723 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SNAP25P60880 206 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 NR1H3Q13133 447 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 FAM200BP0CF97 657 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 GYG1P46976 350 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 GJA8P48165 433 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 NDFIP2Q9NV92 336 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
RAB11FIP1-202ENST00000330843 GOLGA8TH3BQL2 631 aa13.48□□□□□ -0.25
RAB11FIP1-202ENST00000330843 TRIM13O60858 407 aa13.48□□□□□ -0.25
RAB11FIP1-202ENST00000330843 SLC16A2P36021 539 aa13.48□□□□□ -0.25
RAB11FIP1-202ENST00000330843 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms