RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZBED6P86452 979 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 PCGF5Q86SE9 256 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 FBXO16Q8IX29 292 aaPredicted RBP14.42□□□□□ -0.1
RFFL-201ENST00000315249 FAF2Q96CS3 445 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 SDC4P31431 198 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 DCCP43146 1447 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 PLTPP55058 493 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 ORC2Q13416 577 aaPredicted RBP14.42□□□□□ -0.1
RFFL-201ENST00000315249 ENTPD7Q9NQZ7 604 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 HBP1O60381 514 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 HOXA7P31268 230 aaPredicted RBP14.42□□□□□ -0.1
RFFL-201ENST00000315249 PROM2Q8N271 834 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 SARS2Q9NP81 518 aaKnown RBP14.42□□□□□ -0.1
RFFL-201ENST00000315249 STARD7Q9NQZ5 370 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 FZD1Q9UP38 647 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 NOL3O60936 208 aaKnown RBP14.42□□□□□ -0.1
RFFL-201ENST00000315249 ATP11AP98196 1134 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 AP1B1Q10567 949 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 EMC2Q15006 297 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 MXRA8Q9BRK3 442 aa14.42□□□□□ -0.1
RFFL-201ENST00000315249 PQBP1O60828 265 aaKnown RBP14.41□□□□□ -0.1
RFFL-201ENST00000315249 TJP3O95049 919 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 ALDH1A3P47895 512 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 STOX1Q6ZVD7 989 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 HPS3Q969F9 1004 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 PRG3Q9Y2Y8 225 aaPredicted RBP14.41□□□□□ -0.1
RFFL-201ENST00000315249 PPFIA4O75335 1185 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 KRT39Q6A163 491 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 MOV10L1Q9BXT6 1211 aaKnown RBP14.41□□□□□ -0.1
RFFL-201ENST00000315249 RRN3P2A6NIE6 340 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 DFFAO00273 331 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 ATICP31939 592 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
RFFL-201ENST00000315249 MRFAP1L1Q96HT8 127 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 HEMGNQ9BXL5 484 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 JMJD4Q9H9V9 463 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 MAP3K7O43318 606 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 CALB1P05937 261 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 IGDCC4Q8TDY8 1250 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 MTA3Q9BTC8 594 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 GPC4O75487 556 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 COG7P83436 770 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 NSUN2Q08J23 767 aaKnown RBP eCLIP14.41□□□□□ -0.1
RFFL-201ENST00000315249 RNF217Q8TC41 542 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 NUF2Q9BZD4 464 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 AAASQ9NRG9 546 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 KLK14Q9P0G3 267 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 MSH2P43246 934 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 NAALADL2Q58DX5 795 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 EXOC4Q96A65 974 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 AP1M1Q9BXS5 423 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 DNAJC17Q9NVM6 304 aaKnown RBP14.41□□□□□ -0.1
RFFL-201ENST00000315249 SLC4A7Q9Y6M7 1214 aa14.41□□□□□ -0.1
RFFL-201ENST00000315249 PAMP19021 973 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 ZNF512BQ96KM6 892 aaPredicted RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 EPB41L4AQ9HCS5 686 aaPredicted RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 PGRMC1O00264 195 aaKnown RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 ZMYND10O75800 440 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 NPTXRO95502 500 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 BBS9Q3SYG4 887 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 TMEM169Q96HH4 297 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 DHX35Q9H5Z1 703 aaKnown RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 TBK1Q9UHD2 729 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 LSM7Q9UK45 103 aaKnown RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 MANSC4A6NHS7 340 aaPredicted RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 FRA10AC1Q70Z53 315 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 TXNRD3Q86VQ6 643 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 SMAP1Q8IYB5 467 aaPredicted RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 GPC2Q8N158 579 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 KCNH7Q9NS40 1196 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 RNF40O75150 1001 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 ST8SIA6P61647 398 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 SPOPLQ6IQ16 392 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 HOMER3Q9NSC5 361 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 STXBP3O00186 592 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 NVLO15381 856 aaKnown RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 DRAP1Q14919 205 aaPredicted RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 ATF7IP2Q5U623 682 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 DDX50Q9BQ39 737 aaKnown RBP14.4□□□□□ -0.1
RFFL-201ENST00000315249 MROH8Q9H579 483 aa14.4□□□□□ -0.1
RFFL-201ENST00000315249 ATP1A2P50993 1020 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 SH3BP1Q9Y3L3 701 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 JRKLQ9Y4A0 524 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 IGSF3O75054 1194 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 ICAM1P05362 532 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 C2orf54Q08AI8 447 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 EFHC2Q5JST6 749 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 NOTUMQ6P988 496 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 B4GALNT4Q76KP1 1039 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 EPB41L5Q9HCM4 733 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 ATP8A1Q9Y2Q0 1164 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 ATP1A3P13637 1013 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 RAG1P15918 1043 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 RBP5P82980 135 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 PPFIBP2Q8ND30 876 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 PVALEFA0A1B0GWK0 134 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 ARHGAP42A6NI28 874 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 VCAM1P19320 739 aa14.39□□□□□ -0.11
RFFL-201ENST00000315249 RGS7P49802 495 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms