RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CIITAP33076 1130 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 EXOC4Q96A65 974 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.64□□□□□ -1.351e-7■■□□□ 12.5
PRKDC-201ENST00000314191 A6NNZ2 444 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 H7C0C1 242 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SGK1O00141 431 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SART1O43290 800 aaKnown RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TMEM253P0C7T8 217 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 ATP5DP30049 168 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 COPB2P35606 906 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 ATP5OP48047 213 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SNX16P57768 344 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 ZBTB16Q05516 673 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TUBB8Q3ZCM7 444 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SH3BP5LQ7L8J4 393 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 GPRASP2Q96D09 838 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 RNPC3Q96LT9 517 aaKnown RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MKNK1Q9BUB5 465 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 STK33Q9BYT3 514 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TAF1DQ9H5J8 278 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TISP43B9A030 160 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 CAPN9O14815 690 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TGFB2P61812 414 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 PALM2Q8IXS6 379 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SEPT1Q8WYJ6 367 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MRIQ9BWK5 157 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 ABCD1P33897 745 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 KRT81Q14533 505 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 CPA5Q8WXQ8 436 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 DNAJC19Q96DA6 116 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 FAM81BQ96LP2 452 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MED10Q9BTT4 135 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 INTS9Q9NV88 658 aaKnown RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 PPP1R9AQ9ULJ8 1098 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 RTN2O75298 545 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SCP2P22307 547 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 GPC3P51654 580 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 KCNA1Q09470 495 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SNRNP35Q16560 246 aaKnown RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 CCNI2Q6ZMN8 369 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 B4GALNT4Q76KP1 1039 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SLC35G2Q8TBE7 412 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 WDR18Q9BV38 432 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 ZNF507Q8TCN5 953 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TARS2Q9BW92 718 aaKnown RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 KIAA1683Q9H0B3 1180 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 DNAJC18Q9H819 358 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 NUB1Q9Y5A7 615 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MAFGO15525 162 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 ZRANB2O95218 330 aaKnown RBP eCLIP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TTLL4Q14679 1199 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SETDB1Q15047 1291 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 SHISA4Q96DD7 197 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 TRIM51Q9BSJ1 452 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 PI4K2AQ9BTU6 479 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 ANKEF1Q9NU02 776 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MKRN4PQ13434 485 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 IRF2BP1Q8IU81 584 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MKRN1Q9UHC7 482 aaKnown RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MEIS2O14770 477 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 PRKCBP05771 671 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 HSPA6P17066 643 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 EMC2Q15006 297 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 EXOC8Q8IYI6 725 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 MRPL4Q9BYD3 311 aaKnown RBP6.64□□□□□ -1.35
PRKDC-201ENST00000314191 AP5M1Q9H0R1 490 aa6.64□□□□□ -1.35
PRKDC-201ENST00000314191 CARSP49589 748 aaKnown RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 ACTR2P61160 394 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 SLC35G1Q2M3R5 365 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 CCDC13Q8IYE1 715 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 ANKS4BQ8N8V4 417 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 OR2W6PQ8NHA6 318 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 SLC35C1Q96A29 364 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 RUNDC3BQ96NL0 473 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 FMO2Q99518 471 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 MMP19Q99542 508 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 FGFBP2Q9BYJ0 223 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 TBK1Q9UHD2 729 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 ATMINO43313 823 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 MUM1L1Q5H9M0 696 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 TIPINQ9BVW5 301 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 IKZF4Q9H2S9 585 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 SUCLA2Q9P2R7 463 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 PCSK1NQ9UHG2 260 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 DIS3Q9Y2L1 958 aaKnown RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 SCINQ9Y6U3 715 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 CDO1Q16878 200 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 DDX42Q86XP3 938 aaKnown RBP eCLIP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 RBM46Q8TBY0 533 aaKnown RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 PLAAQ9Y263 795 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 SLC26A4O43511 780 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 NPTX2P47972 431 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 FBXL5Q9UKA1 691 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 TTLL3Q9Y4R7 772 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 ALG6Q9Y672 507 aa6.63□□□□□ -1.35
PRKDC-201ENST00000314191 PAPD7Q5XG87 772 aaKnown RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 ZNF571Q7Z3V5 609 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 DMGDHQ9UI17 866 aaKnown RBP6.63□□□□□ -1.35
PRKDC-201ENST00000314191 C2CD6Q53TS8 623 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms