RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 CHGBP05060 677 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 CTNNA1P35221 906 aaKnown RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 MAP7Q14244 749 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 ARHGAP15Q53QZ3 475 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 PROM2Q8N271 834 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 HMX1Q9NP08 348 aaPredicted RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 CD4P01730 458 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 CALB1P05937 261 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 EIF4A3P38919 411 aaKnown RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 TTC39CQ8N584 583 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 TMEM169Q96HH4 297 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 HEY1Q9Y5J3 304 aa11.45□□□□□ -0.58
SYNPO2-201ENST00000307142 SLC12A1Q13621 1099 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 SHCBP1Q8NEM2 672 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 GDAP1L1Q96MZ0 367 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 HACD3Q9P035 362 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 ANAPC7Q9UJX3 599 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 SUPT20HL2P0C7V6 817 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 PRCPP42785 496 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 AP3M2P53677 418 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 PSMC1P62191 440 aaKnown RBP11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 DEPDC1BQ8WUY9 529 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 ASIC4Q96FT7 647 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 EPB41L4AQ9HCS5 686 aaPredicted RBP11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 SNX9Q9Y5X1 595 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 DFFAO00273 331 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 NMT1P30419 496 aaKnown RBP11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 PPP4CP60510 307 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 KCNH2Q12809 1159 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 VWDEQ8N2E2 1590 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 PPP1R12CQ9BZL4 782 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 HAUS4Q9H6D7 363 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 KCNQ5Q9NR82 932 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 NWD1Q149M9 1564 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 MYPNQ86TC9 1320 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 ZNF286BP0CG31 522 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 PAMP19021 973 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 KCNH7Q9NS40 1196 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 TCP1P17987 556 aaKnown RBP11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 HERVK_113P62684 666 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 RBP5P82980 135 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 SNX17Q15036 470 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 FAM83AQ86UY5 434 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 LRRC8AQ8IWT6 810 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 IGDCC4Q8TDY8 1250 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 CA4P22748 312 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 STMN2Q93045 179 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 SENP6Q9GZR1 1112 aaPredicted RBP11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 SPATC1LQ9H0A9 340 aa11.44□□□□□ -0.58
SYNPO2-201ENST00000307142 CYP2C8P10632 490 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 CUL4AQ13619 759 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 SV2CQ496J9 727 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 NAALADL2Q58DX5 795 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 AFAP1L1Q8TED9 768 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 TRIP13Q15645 432 aaPredicted RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 COLEC11Q9BWP8 271 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 KLK14Q9P0G3 267 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 MAD2L2Q9UI95 211 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 PCDHA13Q9Y5I0 950 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 F5H423 210 aaPredicted RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 PPFIA4O75335 1185 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 DDR1Q08345 913 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 AP1B1Q10567 949 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 KRT39Q6A163 491 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 SPTLC3Q9NUV7 552 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 PXDNQ92626 1479 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 FTCDO95954 541 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 IL1R1P14778 569 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 CXCR5P32302 372 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 ACTR2P61160 394 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 FAM102AQ5T9C2 384 aaPredicted RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 TXNRD3Q86VQ6 643 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 TJP3O95049 919 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 SDC4P31431 198 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 CDK17Q00537 523 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 EFHC2Q5JST6 749 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 SPATA24Q86W54 205 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 ENC1O14682 589 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 PLS3P13797 630 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 STX2P32856 288 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 WDR72Q3MJ13 1102 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 FRA10AC1Q70Z53 315 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 NUDCD1Q96RS6 583 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 RTFDC1Q9BY42 306 aaPredicted RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 CNOT8Q9UFF9 292 aaKnown RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 DOLKQ9UPQ8 538 aa11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 PRG3Q9Y2Y8 225 aaPredicted RBP11.43□□□□□ -0.58
SYNPO2-201ENST00000307142 CXCL11O14625 94 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 XRRA1Q6P2D8 792 aa11.42□□□□□ -0.58
SYNPO2-201ENST00000307142 EHD2Q9NZN4 543 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms