RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PGM1P36871 562 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 KCTD1Q719H9 257 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 ROPN1BQ9BZX4 212 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 ROPN1Q9HAT0 212 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 TBC1D22BQ9NU19 505 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 BSDC1Q9NW68 430 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 MTO1Q9Y2Z2 717 aaKnown RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 AFDNP55196 1824 aaKnown RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 BBOX1O75936 387 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CCDC159P0C7I6 412 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 TRPC1P48995 793 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 KCNH2Q12809 1159 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CC2D2BQ6DHV5 1058 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 ARHGAP27Q6ZUM4 889 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 TEX2Q8IWB9 1127 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 HNRNPLLQ8WVV9 542 aaKnown RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 TSPAN17Q96FV3 270 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 GTSE1Q9NYZ3 720 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 A0A1W2PQJ5 194 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 BRAFP15056 766 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 PRCPP42785 496 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CRKLP46109 303 aaKnown RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CUL3Q13618 768 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CYLC2Q14093 348 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 GRM4Q14833 912 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 P3H1Q32P28 736 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 NLRP10Q86W26 655 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 STAG2Q8N3U4 1231 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 TTLL11Q8NHH1 800 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 ADA2Q9NZK5 511 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 KLHL8Q9P2G9 620 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CDV3Q9UKY7 258 aaKnown RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CPDO75976 1380 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 RTN2O75298 545 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 MYO1DO94832 1006 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 DEFA1P59665 94 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 DEFA3P59666 94 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 HEATR6Q6AI08 1181 aaKnown RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 OR6B2Q6IFH4 312 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 ZSWIM5Q9P217 1185 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 FAM47DPA6NHR8 397 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 HNRNPCP07910 306 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■■■ 29.1
SF3B3-201ENST00000302516 PHKA2P46019 1235 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SERPINB9P50453 376 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 KCTD17Q8N5Z5 321 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 FBXL5Q9UKA1 691 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 COBLO75128 1261 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 KLHL2O95198 593 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 ABL1P00519 1130 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CEP55Q53EZ4 464 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 PATL1Q86TB9 770 aaKnown RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 EFHBQ8N7U6 833 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SPATA4Q8NEY3 305 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SH3TC2Q8TF17 1288 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 KRT35Q92764 455 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 HINFPQ9BQA5 517 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 FIS1Q9Y3D6 152 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 TCP11X1B4DZS4 312 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 PSMD14O00487 310 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 APOL1O14791 398 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SRGAP2O75044 1071 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SERPINI2O75830 405 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SPDYE1Q8NFV5 336 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-201ENST00000302516 GCNAQ96QF7 691 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 KCNK16Q96T55 309 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 NEUROG2Q9H2A3 272 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 CCDC134Q9H6E4 229 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 SNX24Q9Y343 169 aa8.1□□□□□ -1.11
SF3B3-201ENST00000302516 DAB1O75553 588 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ACADSP16219 412 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 MAP4P27816 1152 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 GADL1Q6ZQY3 521 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 FAM47EQ6ZV65 393 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 TMEM179Q6ZVK1 233 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 LCA5Q86VQ0 697 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ZBED8Q8IZ13 594 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 RCOR2Q8IZ40 523 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 PUS7LQ9H0K6 701 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 TRABDQ9H4I3 376 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 POLE3Q9NRF9 147 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 UVRAGQ9P2Y5 699 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ALKQ9UM73 1620 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 SSU72P8A0A1W2PR75 194 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 APOA4P06727 396 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 MECOMQ03112 1051 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ADRM1Q16186 407 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ABI1Q8IZP0 508 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 RASGRP4Q8TDF6 673 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 SYN2Q92777 582 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 CCT8L2Q96SF2 557 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 MRPL1Q9BYD6 325 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 LY9Q9HBG7 655 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 GID8Q9NWU2 228 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 KCNQ4P56696 695 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 SNRPFP62306 86 aaKnown RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ATP2C1P98194 919 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ITIH4Q14624 930 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 IMPG1Q17R60 797 aa8.09□□□□□ -1.11
SF3B3-201ENST00000302516 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms