RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 LAMC2Q13753 1193 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 TMEM132DQ14C87 1099 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 IMPG1Q17R60 797 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ACBD5Q5T8D3 534 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ITPRIPL1Q6GPH6 555 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 LRRC8AQ8IWT6 810 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 PDIK1LQ8N165 341 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 PROM2Q8N271 834 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 SCFD2Q8WU76 684 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 DACT3Q96B18 629 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 MTMR4Q9NYA4 1195 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 CLTCL1P53675 1640 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ASAP2O43150 1006 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 CD4P01730 458 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 THPOP40225 353 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 HADHAP40939 763 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SULT1E1P49888 294 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 BFSP2Q13515 415 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 NECTIN1Q15223 517 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 DPCR1Q3MIW9 517 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 KRT39Q6A163 491 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 FBXL13Q8NEE6 735 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TMEM143Q96AN5 459 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SPDL1Q96EA4 605 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TSSK1BQ9BXA7 367 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TRIM45Q9H8W5 580 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 CYP26B1Q9NR63 512 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SAMSN1Q9NSI8 373 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ERAP1Q9NZ08 941 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 AGAP1Q9UPQ3 857 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 CROCC2H7BZ55 1655 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 USP42Q9H9J4 1324 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 IQANK1A0A1B0GTG1 560 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TDP2O95551 362 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 NR3C2P08235 984 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SKIP12755 728 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 PLS3P13797 630 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 RBP5P82980 135 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ITPK1Q13572 414 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 FAM102AQ5T9C2 384 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TMCO4Q5TGY1 634 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 COL23A1Q86Y22 540 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TBC1D19Q8N5T2 526 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ULK4Q96C45 1275 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 C11orf70Q9BRQ4 267 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 MTA3Q9BTC8 594 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TRIM54Q9BYV2 358 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 PLEKHA5Q9HAU0 1116 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SYNGAP1Q96PV0 1343 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SERPINB6P35237 376 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 RFC5P40937 340 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TBCCQ15814 346 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SLC35F6Q8N357 371 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ENOX1Q8TC92 643 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 EGFL8Q99944 293 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 COLEC11Q9BWP8 271 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 INTS2Q9H0H0 1204 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 IP6K2Q9UHH9 426 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 RCOR1Q9UKL0 485 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 IQGAP3Q86VI3 1631 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 KIAA0391O15091 583 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 PRPF4O43172 522 aaKnown RBP eCLIP7.37□□□□□ -1.239e-6■□□□□ 10.5
GAPVD1-202ENST00000297933 DGAT1O75907 488 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 RCN2Q14257 317 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ANO4Q32M45 955 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 SV2CQ496J9 727 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 RESP18Q5W5W9 173 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 GBP7Q8N8V2 638 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 CFAP61Q8NHU2 1237 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 MIPOL1Q8TD10 442 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 DHX35Q9H5Z1 703 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 EPS15L1Q9UBC2 864 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 PCSK1NQ9UHG2 260 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 PVALEFA0A1B0GWK0 134 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 C2CD2LO14523 706 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 MGEA5O60502 916 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 GCLCP48506 637 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 GPC5P78333 572 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ZNF543Q08ER8 600 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 NAALADL2Q58DX5 795 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 HABP4Q5JVS0 413 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 HEATR6Q6AI08 1181 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 EFCAB12Q6NXP0 572 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ALKBH5Q6P6C2 394 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 STAG2Q8N3U4 1231 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TTC8Q8TAM2 541 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ZKSCAN4Q969J2 545 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 YME1L1Q96TA2 773 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 MUC3BQ9H195 1237 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TSR3Q9UJK0 312 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 USP31Q70CQ4 1352 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 TECPR2O15040 1411 aa7.37□□□□□ -1.23
GAPVD1-202ENST00000297933 ATN1P54259 1190 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CCDC15Q0P6D6 951 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 RESTQ13127 1097 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 ENOSF1Q7L5Y1 443 aa7.36□□□□□ -1.23
GAPVD1-202ENST00000297933 CALR3Q96L12 384 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms