RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SLC12A3P55017 1021 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 ADGRE1Q14246 886 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 TMEM132AQ24JP5 1023 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 DRC1Q96MC2 740 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 RC3H2Q9HBD1 1191 aaKnown RBP13.34□□□□□ -0.27
HMGB2-201ENST00000296503 FAM105AQ9NUU6 356 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
HMGB2-201ENST00000296503 TSPAN1O60635 241 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 PPP6R2O75170 966 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 CTNNB1P35222 781 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 BMPR1AP36894 532 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 RAB27AP51159 221 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 PEX3P56589 373 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 MCM6Q14566 821 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 RRAGBQ5VZM2 374 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 ATL3Q6DD88 541 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 NOTUMQ6P988 496 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 PGBD4Q96DM1 585 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 TIPINQ9BVW5 301 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 TRAIPQ9BWF2 469 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 PRMT7Q9NVM4 692 aaPredicted RBP13.33□□□□□ -0.27
HMGB2-201ENST00000296503 RWDD3Q9Y3V2 267 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.27
HMGB2-201ENST00000296503 MRPL42Q9Y6G3 142 aaKnown RBP13.33□□□□□ -0.27
HMGB2-201ENST00000296503 MORC2Q9Y6X9 1032 aaPredicted RBP13.33□□□□□ -0.27
HMGB2-201ENST00000296503 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 ZNF623O75123 536 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 YEATS4O95619 227 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
HMGB2-201ENST00000296503 GUCY2CP25092 1073 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 NUCB2P80303 420 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
HMGB2-201ENST00000296503 GPM6BQ13491 265 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 CCDC85BQ15834 202 aaPredicted RBP13.33□□□□□ -0.28
HMGB2-201ENST00000296503 MAPK6Q16659 721 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 GPBP1Q86WP2 473 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 MICALL1Q8N3F8 863 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 MAFAQ8NHW3 353 aaPredicted RBP13.33□□□□□ -0.28
HMGB2-201ENST00000296503 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 GDPD5Q8WTR4 605 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 RAD54LQ92698 747 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 LPPQ93052 612 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 CHD9Q3L8U1 2897 aa13.33□□□□□ -0.28
HMGB2-201ENST00000296503 NPHP3-ACAD11A0A0J9YXS1 232 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 K7ERI5 159 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 B4GALT5O43286 388 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 BRD1O95696 1058 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 RB1P06400 928 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 ARF4P18085 180 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 NPTX2P47972 431 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 EFNA5P52803 228 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 AMHR2Q16671 573 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 CDCA2Q69YH5 1023 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 ZNF598Q86UK7 904 aaKnown RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 CDR2LQ86X02 465 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 DAW1Q8N136 415 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 LARP4BQ92615 738 aaKnown RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 CLP1Q92989 425 aaKnown RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 CASD1Q96PB1 797 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 FZD8Q9H461 694 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 KMT5AQ9NQR1 393 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
HMGB2-201ENST00000296503 KCNG1Q9UIX4 513 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 PRDM4Q9UKN5 801 aa13.32□□□□□ -0.28
HMGB2-201ENST00000296503 H3BNC9 293 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 PRKCBP05771 671 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 ATF7P17544 494 aaPredicted RBP13.31□□□□□ -0.28
HMGB2-201ENST00000296503 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
HMGB2-201ENST00000296503 SMTNP53814 917 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
HMGB2-201ENST00000296503 ARSHQ5FYA8 562 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 UBXN11Q5T124 520 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 KCNG4Q8TDN1 519 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 LRRC15Q8TF66 581 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 CCDC51Q96ER9 411 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 EIF2AQ9BY44 585 aaKnown RBP13.31□□□□□ -0.28
HMGB2-201ENST00000296503 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 AAASQ9NRG9 546 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 RNF19AQ9NV58 838 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 ZDHHC9Q9Y397 364 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 A0A1B0GUA9 196 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 ACKR2O00590 384 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 LPXNO60711 386 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 CUTAO60888 179 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 ITGA4P13612 1032 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 ME1P48163 572 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 MAPK7Q13164 816 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 FAM187BQ17R55 369 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 CLLU1OSQ5K130 101 aa13.31□□□□□ -0.28
HMGB2-201ENST00000296503 GLB1LQ6UWU2 654 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms