RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 NDST4Q9H3R1 872 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 CBX8Q9HC52 389 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 THAP12O43422 761 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 C1QTNF8P60827 252 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 SNX17Q15036 470 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 SLC27A1Q6PCB7 646 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 CPLX3Q8WVH0 158 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 NIFKQ9BYG3 293 aaKnown RBP8.41□□□□□ -1.06
EPHA4-201ENST00000281821 ST6GALNAC4Q9H4F1 302 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 CDC25BP30305 580 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 CRYBB1P53674 252 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-201ENST00000281821 NFE2Q16621 373 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-201ENST00000281821 ADSSL1Q8N142 457 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 UBL4BQ8N7F7 174 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 CLEC4DQ8WXI8 215 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 TMEM60Q9H2L4 133 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 SCINQ9Y6U3 715 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 TBC1D8O95759 1140 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 ADCYAP1R1P41586 468 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 PTK7Q13308 1070 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-201ENST00000281821 PPM1KQ8N3J5 372 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 TMEM35BQ8NCS4 154 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 ZNF592Q92610 1267 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 REEP2Q9BRK0 252 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 VPS16Q9H269 839 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 TSPYL2Q9H2G4 693 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-201ENST00000281821 TAB2Q9NYJ8 693 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 GADD45BO75293 160 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-201ENST00000281821 STK10O94804 968 aaKnown RBP8.41□□□□□ -1.06
EPHA4-201ENST00000281821 H2AFZP0C0S5 128 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 H2AFVQ71UI9 128 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 CYP3A43Q9HB55 503 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 LRRC4Q9HBW1 653 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 HPSEQ9Y251 543 aa8.41□□□□□ -1.06
EPHA4-201ENST00000281821 SHANK3Q9BYB0 1731 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 FAM86B1E9PN63 330 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 INHAP05111 366 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 FAM86B2P0C5J1 330 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 RBM10P98175 930 aaKnown RBP8.4□□□□□ -1.06
EPHA4-201ENST00000281821 TOGARAM2Q6ZUX3 1019 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 NUDT18Q6ZVK8 323 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 BBS5Q8N3I7 341 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 EMID1Q96A84 441 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-201ENST00000281821 RUFY1Q96T51 708 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 PORCNQ9H237 461 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 WDR35Q9P2L0 1181 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 PCDHB7Q9Y5E2 793 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 UMODL1Q5DID0 1318 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 KIF3CO14782 793 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 SLC37A4O43826 429 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 SARM1Q6SZW1 724 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 CCDC170Q8IYT3 715 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 CCAR2Q8N163 923 aaKnown RBP8.4□□□□□ -1.06
EPHA4-201ENST00000281821 BAG1Q99933 345 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-201ENST00000281821 HSD17B14Q9BPX1 270 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 RASAL2Q9UJF2 1139 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 TBX20Q9UMR3 447 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 RNF8O76064 485 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 EIF4BP23588 611 aaKnown RBP8.4□□□□□ -1.06
EPHA4-201ENST00000281821 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
EPHA4-201ENST00000281821 VAMP7P51809 220 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 CUL4BQ13620 913 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 TMEM132DQ14C87 1099 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 ZNF699Q32M78 642 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.4□□□□□ -1.06
EPHA4-201ENST00000281821 MED10Q9BTT4 135 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 ATP11BQ9Y2G3 1177 aa8.4□□□□□ -1.06
EPHA4-201ENST00000281821 N4BP2Q86UW6 1770 aaPredicted RBP8.4□□□□□ -1.07
EPHA4-201ENST00000281821 EIF3CLB5ME19 914 aaKnown RBP8.4□□□□□ -1.07
EPHA4-201ENST00000281821 KRT10P13645 584 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 GRB10Q13322 594 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 ZNF792Q3KQV3 632 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 C4orf50Q6ZRC1 276 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 EIF3CQ99613 913 aaKnown RBP8.4□□□□□ -1.07
EPHA4-201ENST00000281821 CFHR5Q9BXR6 569 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 HAUS4Q9H6D7 363 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 ITGB5P18084 799 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 MAGEA1P43355 309 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 ZNF75DP51815 510 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 GJA9P57773 515 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 MRPS6P82932 125 aaKnown RBP8.4□□□□□ -1.07
EPHA4-201ENST00000281821 SMARCB1Q12824 385 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 DPYDQ12882 1025 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.4□□□□□ -1.07
EPHA4-201ENST00000281821 HAUS1Q96CS2 278 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 FAXDC2Q96IV6 333 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 DDX50Q9BQ39 737 aaKnown RBP8.4□□□□□ -1.07
EPHA4-201ENST00000281821 APOL6Q9BWW8 343 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 LSM14BQ9BX40 385 aaKnown RBP8.4□□□□□ -1.07
EPHA4-201ENST00000281821 MAPK8IP1Q9UQF2 711 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 PCDHB12Q9Y5F1 795 aa8.4□□□□□ -1.07
EPHA4-201ENST00000281821 A6NJR5 290 aa8.39□□□□□ -1.07
EPHA4-201ENST00000281821 SELPP16109 830 aa8.39□□□□□ -1.07
EPHA4-201ENST00000281821 VEGFBP49765 207 aa8.39□□□□□ -1.07
EPHA4-201ENST00000281821 TAF6P49848 677 aa8.39□□□□□ -1.07
EPHA4-201ENST00000281821 DPF3Q92784 378 aa8.39□□□□□ -1.07
EPHA4-201ENST00000281821 CELF4Q9BZC1 486 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms