RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 SCFD2Q8WU76 684 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 HSPBP1Q9NZL4 362 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 USP27XA6NNY8 438 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 NNTQ13423 1086 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 PLCB4Q15147 1175 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 PTPAQ15257 358 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 ZC2HC1CQ53FD0 456 aaPredicted RBP16.47■□□□□ 0.23
TIMP3-201ENST00000266085 GPRC5AQ8NFJ5 357 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 ZNF564Q8TBZ8 553 aaPredicted RBP16.47■□□□□ 0.23
TIMP3-201ENST00000266085 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 PFASO15067 1338 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 MYBP10242 640 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 CCT5P48643 541 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 MTF1Q14872 753 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 MUM1L1Q5H9M0 696 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 SCN4BQ8IWT1 228 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 TTC39CQ8N584 583 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 MOV10L1Q9BXT6 1211 aaKnown RBP16.47■□□□□ 0.23
TIMP3-201ENST00000266085 TBK1Q9UHD2 729 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 STK38LQ9Y2H1 464 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 SALL1Q9NSC2 1324 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 SOX5P35711 763 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 TMED2Q15363 201 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 NTRK3Q16288 839 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 NXNQ6DKJ4 435 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 RAPH1Q70E73 1250 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 CENPUQ71F23 418 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 HSPH1Q92598 858 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 HEMGNQ9BXL5 484 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 BCAP29Q9UHQ4 241 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
TIMP3-201ENST00000266085 SNX24Q9Y343 169 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 MSH4O15457 936 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 CELF2O95319 508 aaKnown RBP16.46■□□□□ 0.23
TIMP3-201ENST00000266085 CETPP11597 493 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 AP3M2P53677 418 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 BACE1P56817 501 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 TSNAXIP1Q2TAA8 658 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 TTC13Q8NBP0 860 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 OSBPL9Q96SU4 736 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
TIMP3-201ENST00000266085 VCX3BQ9H321 246 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 KIAA0391O15091 583 aaKnown RBP16.46■□□□□ 0.23
TIMP3-201ENST00000266085 GH1P01241 217 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 PLS3P13797 630 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
TIMP3-201ENST00000266085 PYROXD1Q8WU10 500 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 GOLGA8CPA6NN73 597 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 WDR72Q3MJ13 1102 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 XRRA1Q6P2D8 792 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 EFCC1Q9HA90 598 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 WDR70Q9NW82 654 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 ASNSD1Q9NWL6 643 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 LCMT1Q9UIC8 334 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 MAGED2Q9UNF1 606 aaPredicted RBP16.46■□□□□ 0.23
TIMP3-201ENST00000266085 CAPN7Q9Y6W3 813 aa16.46■□□□□ 0.23
TIMP3-201ENST00000266085 SLC16A3O15427 465 aaKnown RBP16.46■□□□□ 0.22
TIMP3-201ENST00000266085 MT-ND3P03897 115 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 ZKSCAN8Q15776 578 aaPredicted RBP16.46■□□□□ 0.22
TIMP3-201ENST00000266085 TRIM72Q6ZMU5 477 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 THEM5Q8N1Q8 247 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 RAET1EQ8TD07 263 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 RFFLQ8WZ73 363 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 NUP85Q9BW27 656 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 AGXT2Q9BYV1 514 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 SMYD2Q9NRG4 433 aa16.46■□□□□ 0.22
TIMP3-201ENST00000266085 NOVA2Q9UNW9 492 aaKnown RBP16.46■□□□□ 0.22
TIMP3-201ENST00000266085 PNMA6AP0CW24 399 aaPredicted RBP16.45■□□□□ 0.22
TIMP3-201ENST00000266085 BIRC2Q13490 618 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 SDC4P31431 198 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 EMC2Q15006 297 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 LMNTD2Q8IXW0 634 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 KCTD17Q8N5Z5 321 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 CHP1Q99653 195 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
TIMP3-201ENST00000266085 M0QYV0 167 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 CCDC197Q8NCU1 140 aa16.45■□□□□ 0.22
TIMP3-201ENST00000266085 DNAJC17Q9NVM6 304 aaKnown RBP16.45■□□□□ 0.22
TIMP3-201ENST00000266085 PIN4Q9Y237 131 aaKnown RBP16.45■□□□□ 0.22
TIMP3-201ENST00000266085 PITPNM2Q9BZ72 1349 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 ARHGAP42A6NI28 874 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 ACSL3O95573 720 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 PSMC1P62191 440 aaKnown RBP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 ERO1BQ86YB8 467 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 TRIM42Q8IWZ5 723 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 ACAP3Q96P50 834 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 CNOT10Q9H9A5 744 aaKnown RBP16.44■□□□□ 0.22
TIMP3-201ENST00000266085 A8MXQ7 604 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 SHMT1P34896 483 aa16.44■□□□□ 0.22
TIMP3-201ENST00000266085 TOB1P50616 345 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms