RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SLC37A4O43826 429 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 UNC5CO95185 931 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 PLS3P13797 630 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 TUBP50607 506 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 IRX4P78413 519 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 NT5DC3Q86UY8 548 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 CTAGE3PQ8IX95 158 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 PGM2Q96G03 612 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 GORASP1Q9BQQ3 440 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 MOV10L1Q9BXT6 1211 aaKnown RBP17.42■□□□□ 0.38
GPC1-201ENST00000264039 SYNCQ9H7C4 482 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 KRT36O76013 467 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 RTN3O95197 1032 aaPredicted RBP17.41■□□□□ 0.38
GPC1-201ENST00000264039 FAM13CQ8NE31 585 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 LARSQ9P2J5 1176 aaKnown RBP17.41■□□□□ 0.38
GPC1-201ENST00000264039 PEAK1Q9H792 1746 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 SRRM3A6NNA2 597 aaPredicted RBP17.41■□□□□ 0.38
GPC1-201ENST00000264039 DNAJC6O75061 913 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 PIK3CAP42336 1068 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 RCAN1P53805 252 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 DHX34Q14147 1143 aaKnown RBP17.41■□□□□ 0.38
GPC1-201ENST00000264039 USH1GQ495M9 461 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 PROM2Q8N271 834 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 CENPKQ9BS16 269 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 FGFBP2Q9BYJ0 223 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 COMTP21964 271 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 TPP2P29144 1249 aaPredicted RBP17.41■□□□□ 0.38
GPC1-201ENST00000264039 NPY5RQ15761 445 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 PIGWQ7Z7B1 504 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 ARHGAP24Q8N264 748 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 BHMT2Q9H2M3 363 aa17.41■□□□□ 0.38
GPC1-201ENST00000264039 PPARGC1AQ9UBK2 798 aaKnown RBP17.41■□□□□ 0.38
GPC1-201ENST00000264039 DIP2BQ9P265 1576 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 PITPNM2Q9BZ72 1349 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 PHF2O75151 1096 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 SP100P23497 879 aaPredicted RBP17.4■□□□□ 0.38
GPC1-201ENST00000264039 HIBADHP31937 336 aaKnown RBP17.4■□□□□ 0.38
GPC1-201ENST00000264039 PGM1P36871 562 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 FUT2Q10981 343 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 BNIP1Q12981 228 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 C1orf146Q5VVC0 180 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 LRRC15Q8TF66 581 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 MARCOQ9UEW3 520 aaPredicted RBP17.4■□□□□ 0.38
GPC1-201ENST00000264039 PTENP60484 403 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 C2CD6Q53TS8 623 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.38
GPC1-201ENST00000264039 ATXN2LQ8WWM7 1075 aaKnown RBP17.4■□□□□ 0.38
GPC1-201ENST00000264039 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
GPC1-201ENST00000264039 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
GPC1-201ENST00000264039 DDX3XO00571 662 aaKnown RBP eCLIP17.39■□□□□ 0.381e-6■■■□□ 15.2
GPC1-201ENST00000264039 ZBED4O75132 1171 aa17.39■□□□□ 0.38
GPC1-201ENST00000264039 NR3C1P04150 777 aa17.39■□□□□ 0.38
GPC1-201ENST00000264039 LDHBP07195 334 aaKnown RBP17.39■□□□□ 0.38
GPC1-201ENST00000264039 KPNB1Q14974 876 aaKnown RBP17.39■□□□□ 0.38
GPC1-201ENST00000264039 LRRC55Q6ZSA7 311 aa17.39■□□□□ 0.38
GPC1-201ENST00000264039 PRUNE1Q86TP1 453 aa17.39■□□□□ 0.38
GPC1-201ENST00000264039 CLEC10AQ8IUN9 316 aa17.39■□□□□ 0.38
GPC1-201ENST00000264039 ST13P4Q8IZP2 240 aaPredicted RBP17.39■□□□□ 0.38
GPC1-201ENST00000264039 TNFRSF25Q93038 417 aa17.39■□□□□ 0.38
GPC1-201ENST00000264039 SUDS3Q9H7L9 328 aaPredicted RBP17.39■□□□□ 0.38
GPC1-201ENST00000264039 ATP5HO75947 161 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 FESP07332 822 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 BCRP11274 1271 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 DESP17661 470 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 ATP6V1C1P21283 382 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 PON1P27169 355 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 HSPA1LP34931 641 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 ECHDC2Q86YB7 292 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 RBBP8NLQ8NC74 664 aaPredicted RBP17.39■□□□□ 0.37
GPC1-201ENST00000264039 FAM81AQ8TBF8 368 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 ARHGEF26Q96DR7 871 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 CEP63Q96MT8 703 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 TRABDQ9H4I3 376 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 DCLRE1BQ9H816 532 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 DDX18Q9NVP1 670 aaKnown RBP17.39■□□□□ 0.37
GPC1-201ENST00000264039 NMRK1Q9NWW6 199 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 FAM47DPA6NHR8 397 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 NOL4O94818 638 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 CSF1RP07333 972 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L24Q0WX57 530 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 SYCP2LQ5T4T6 812 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 USP17L6PQ6QN14 398 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 CARD9Q9H257 536 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
GPC1-201ENST00000264039 FAF1Q9UNN5 650 aaPredicted RBP17.39■□□□□ 0.37
GPC1-201ENST00000264039 ENO1P06733 434 aaKnown RBP17.38■□□□□ 0.37
GPC1-201ENST00000264039 IL2RBP14784 551 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 ITGA8P53708 1063 aa17.38■□□□□ 0.37
GPC1-201ENST00000264039 PSMD6Q15008 389 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms