RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ENO4A6NNW6 628 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 PDE2AO00408 941 aaPredicted RBP17.57■□□□□ 0.4
CTCF-201ENST00000264010 NOL4O94818 638 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 HGSNATQ68CP4 663 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 WHAMMQ8TF30 809 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 AGO4Q9HCK5 861 aaKnown RBP17.57■□□□□ 0.4
CTCF-201ENST00000264010 HSPBP1Q9NZL4 362 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 EHD2Q9NZN4 543 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 ABCD1P33897 745 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 GMPSP49915 693 aaPredicted RBP17.57■□□□□ 0.4
CTCF-201ENST00000264010 XRRA1Q6P2D8 792 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 AP1M1Q9BXS5 423 aa17.57■□□□□ 0.4
CTCF-201ENST00000264010 DENND3A2RUS2 1198 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 MTMR3Q13615 1198 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 ANKEF1Q9NU02 776 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 HPCAL4Q9UM19 191 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 NR3C2P08235 984 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 HARSP12081 509 aaKnown RBP17.56■□□□□ 0.4
CTCF-201ENST00000264010 GGCXP38435 758 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 COG2Q14746 738 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 EPM2AIP1Q7L775 607 aaPredicted RBP17.56■□□□□ 0.4
CTCF-201ENST00000264010 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 APOBEC3FQ8IUX4 373 aaKnown RBP17.56■□□□□ 0.4
CTCF-201ENST00000264010 CABS1Q96KC9 395 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 G3BP2Q9UN86 482 aaKnown RBP17.56■□□□□ 0.4
CTCF-201ENST00000264010 SNRPFP62306 86 aaKnown RBP17.56■□□□□ 0.4
CTCF-201ENST00000264010 SAMD7Q7Z3H4 446 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 ZNF280CQ8ND82 737 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 ATG4CQ96DT6 458 aa17.56■□□□□ 0.4
CTCF-201ENST00000264010 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.45e-8■■■□□ 15.1
CTCF-201ENST00000264010 MTRF1LQ9UGC7 380 aaKnown RBP17.56■□□□□ 0.4
CTCF-201ENST00000264010 DBR1Q9UK59 544 aaKnown RBP17.56■□□□□ 0.4
CTCF-201ENST00000264010 TLR2O60603 784 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 PCK1P35558 622 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 TGFB2P61812 414 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 NAA35Q5VZE5 725 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 HOXC10Q9NYD6 342 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 DIS3Q9Y2L1 958 aaKnown RBP17.55■□□□□ 0.4
CTCF-201ENST00000264010 TAF1LQ8IZX4 1826 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTCF-201ENST00000264010 HMGCS2P54868 508 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 MESDQ14696 234 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 MTERF2Q49AM1 385 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 B4GALNT4Q76KP1 1039 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 AGPAT1Q99943 283 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 CSADQ9Y600 493 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 CCDC160A6NGH7 325 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 LRRIQ3A6PVS8 624 aaPredicted RBP17.55■□□□□ 0.4
CTCF-201ENST00000264010 P4HA2O15460 535 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 SATB1Q01826 763 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 MEI1Q5TIA1 1274 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 RUFY4Q6ZNE9 571 aa17.55■□□□□ 0.4
CTCF-201ENST00000264010 TLDC2A0PJX2 215 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 LRRIQ4A6NIV6 560 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 H3BQF6 201 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 TGFB1I1O43294 461 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 VCAM1P19320 739 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 PRKCIP41743 596 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 IFT88Q13099 833 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 CUL1Q13616 776 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 SWSAP1Q6NVH7 229 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 ADAT2Q7Z6V5 191 aaKnown RBP17.54■□□□□ 0.4
CTCF-201ENST00000264010 RDM1Q8NG50 284 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 FAM81BQ96LP2 452 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 ACAD9Q9H845 621 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 DMGDHQ9UI17 866 aaKnown RBP17.54■□□□□ 0.4
CTCF-201ENST00000264010 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 FBXL5Q9UKA1 691 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 MYH8P13535 1937 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 CLTAP09496 248 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
CTCF-201ENST00000264010 ITGB5P18084 799 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 RARRES1P49788 294 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 MTMR14Q8NCE2 650 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
CTCF-201ENST00000264010 ANKRD62A6NC57 917 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 MAFGO15525 162 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 TMEM253P0C7T8 217 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 NPEPPSP55786 919 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 LIN9Q5TKA1 542 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 PLA2G4FQ68DD2 849 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 KRT39Q6A163 491 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 RPUSD2Q8IZ73 545 aaKnown RBP17.54■□□□□ 0.4
CTCF-201ENST00000264010 TPCN2Q8NHX9 752 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 P2RX7Q99572 595 aaKnown RBP17.54■□□□□ 0.4
CTCF-201ENST00000264010 PDCD2LQ9BRP1 358 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 AZI2Q9H6S1 392 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 ATP6V0A4Q9HBG4 840 aa17.54■□□□□ 0.4
CTCF-201ENST00000264010 ESYT3A0FGR9 886 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 MYZAPP0CAP1 466 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 GPC5P78333 572 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 KIAA1755Q5JYT7 1200 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 SLC7A3Q8WY07 619 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 ZNF653Q96CK0 615 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 SAAL1Q96ER3 474 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 MOV10L1Q9BXT6 1211 aaKnown RBP17.53■□□□□ 0.4
CTCF-201ENST00000264010 DPH5Q9H2P9 285 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 SLC38A10Q9HBR0 1119 aa17.53■□□□□ 0.4
CTCF-201ENST00000264010 FAM114A2Q9NRY5 505 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms