RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 DMGDHQ9UI17 866 aaKnown RBP15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 MYH11P35749 1972 aa15.86■□□□□ 0.13
TRAFD1-201ENST00000257604 KRT76Q01546 638 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 BIRC3Q13489 604 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 DHX38Q92620 1227 aaKnown RBP15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 ZBTB45Q96K62 511 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 NAGPAQ9UK23 515 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 AGPSO00116 658 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 PPFIA4O75335 1185 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 ADRB2P07550 413 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 SRGAP2CP0DJJ0 459 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 TNNI1P19237 187 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 GNPTABQ3T906 1256 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 TMEM63BQ5T3F8 832 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 GJC2Q5T442 439 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 C9orf131Q5VYM1 1079 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 TLR10Q9BXR5 811 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 TRIM31Q9BZY9 425 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 POLR3FQ9H1D9 316 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 RBM12Q9NTZ6 932 aaKnown RBP15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 GUCY2CP25092 1073 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 COPB2P35606 906 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 MXI1P50539 228 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 CORO7P57737 925 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 CETN1Q12798 172 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 OTUD6AQ7L8S5 288 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 ZBTB33Q86T24 672 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 GPC2Q8N158 579 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 KRT12Q99456 494 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 EFCC1Q9HA90 598 aa15.85■□□□□ 0.13
TRAFD1-201ENST00000257604 GOLGA6CA6NDK9 693 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 EIF3DO15371 548 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 H2AFZP0C0S5 128 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 GOLGA6DP0CG33 693 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 HNRNPH3P31942 346 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 SNRNP35Q16560 246 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 CCDC70Q6NSX1 233 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 H2AFVQ71UI9 128 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 PLEKHO2Q8TD55 490 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 SIX2Q9NPC8 291 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 GOLGA6AQ9NYA3 693 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 GINS2Q9Y248 185 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 LOC102724159A0A0B4J2E5 919 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 SSU72P8A0A1W2PR75 194 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 GOLGA6BA6NDN3 693 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 DDX3XO00571 662 aaKnown RBP eCLIP15.84■□□□□ 0.133e-8■■■□□ 18.8
TRAFD1-201ENST00000257604 CKAP4Q07065 602 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 ZNF211Q13398 564 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 PWP2Q15269 919 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 STXBP2Q15833 593 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 ASTE1Q2TB18 679 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 ICE2Q659A1 982 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 TEX2Q8IWB9 1127 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 LRRC71Q8N4P6 559 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 SPATA4Q8NEY3 305 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 ATP6V0A1Q93050 837 aa15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 NUCKS1Q9H1E3 243 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-201ENST00000257604 CYP26A1O43174 497 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 PSAPP07602 524 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 GJB1P08034 283 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 CYP2C8P10632 490 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 GUCY2FP51841 1108 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 JAK3P52333 1124 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 GALCP54803 685 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 MAP9Q49MG5 647 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 PAPD7Q5XG87 772 aaKnown RBP15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 PEX26Q7Z412 305 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 CREG2Q8IUH2 290 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 TRAPPC12Q8WVT3 735 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 SEL1LQ9UBV2 794 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 AFG3L2Q9Y4W6 797 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 SNCAIPQ9Y6H5 919 aa15.83■□□□□ 0.13
TRAFD1-201ENST00000257604 ADGRA3Q8IWK6 1321 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 RPTORQ8N122 1335 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 NF2P35240 595 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 LIG4P49917 911 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 CDK17Q00537 523 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 SLC30A5Q8TAD4 765 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 FAM76AQ8TAV0 307 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 BCAS4Q8TDM0 211 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 COPS5Q92905 334 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 TBX20Q9UMR3 447 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 C19orf81C9J6K1 198 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 F8VZ95 297 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 RPS6KA5O75582 802 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 BCRP11274 1271 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 CDR1P51861 262 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 MARSP56192 900 aaKnown RBP15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 PDCLQ13371 301 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 RPS6KA1Q15418 735 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 B3GNT9Q6UX72 402 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 CCNI2Q6ZMN8 369 aaPredicted RBP15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 METTL13Q8N6R0 699 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 IFT74Q96LB3 600 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 SPON1Q9HCB6 807 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 APEX2Q9UBZ4 518 aa15.83■□□□□ 0.12
TRAFD1-201ENST00000257604 GRID2IPA4D2P6 1211 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 SOX5P35711 763 aa15.82■□□□□ 0.12
TRAFD1-201ENST00000257604 ZNF131P52739 623 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms