RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 PLCG1P19174 1290 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 EFNA5P52803 228 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 CCDC85BQ15834 202 aaPredicted RBP27.71■■■□□ 2.03
LSM7-201ENST00000252622 MAPK6Q16659 721 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 KRI1Q8N9T8 703 aaKnown RBP27.71■■■□□ 2.03
LSM7-201ENST00000252622 LINC00301Q8NCQ3 95 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 PPM1EQ8WY54 764 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 LPPQ93052 612 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 C17orf75Q9HAS0 396 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 POLD4Q9HCU8 107 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 BLOC1S4Q9NUP1 217 aa27.71■■■□□ 2.03
LSM7-201ENST00000252622 A0A1B0GUA9 196 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 LAG3P18627 525 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 NCLP19338 710 aaKnown RBP27.7■■■□□ 2.02
LSM7-201ENST00000252622 PKP1Q13835 747 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 STK38Q15208 465 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 CSPP1Q1MSJ5 1256 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 SPOUT1Q5T280 376 aaKnown RBP27.7■■■□□ 2.02
LSM7-201ENST00000252622 FOXD4L5Q5VV16 416 aaPredicted RBP27.7■■■□□ 2.02
LSM7-201ENST00000252622 GLB1LQ6UWU2 654 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 LRRC55Q6ZSA7 311 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 LRRC15Q8TF66 581 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 FOXD4L4Q8WXT5 416 aaPredicted RBP27.7■■■□□ 2.02
LSM7-201ENST00000252622 SYMPKQ92797 1274 aaKnown RBP27.7■■■□□ 2.02
LSM7-201ENST00000252622 EPSTI1Q96J88 318 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 CLIC6Q96NY7 704 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 HCSTQ9UBK5 93 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 PCDHB12Q9Y5F1 795 aa27.7■■■□□ 2.02
LSM7-201ENST00000252622 MEIS3P2A8K0S8 358 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 YEATS4O95619 227 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 PRKCBP05771 671 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 DMP1Q13316 513 aaPredicted RBP27.69■■■□□ 2.02
LSM7-201ENST00000252622 SLC27A1Q6PCB7 646 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 USP49Q70CQ1 688 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 SMG8Q8ND04 991 aaKnown RBP27.69■■■□□ 2.02
LSM7-201ENST00000252622 RAD54LQ92698 747 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 KIFC3Q9BVG8 833 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 EIF2AQ9BY44 585 aaKnown RBP27.69■■■□□ 2.02
LSM7-201ENST00000252622 IPPQ9Y573 584 aa27.69■■■□□ 2.02
LSM7-201ENST00000252622 PHLPP2Q6ZVD8 1323 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 ACKR2O00590 384 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 GRM6O15303 877 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 TXLNAP40222 546 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 NPTX2P47972 431 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 PEX3P56589 373 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 TIGD5Q53EQ6 642 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 SPECC1Q5M775 1068 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 AGMOQ6ZNB7 445 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 KLHL23Q8NBE8 558 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 COLGALT1Q8NBJ5 622 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 CCDC39Q9UFE4 941 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 PLAGL2Q9UPG8 496 aa27.68■■■□□ 2.02
LSM7-201ENST00000252622 SPTLC2O15270 562 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 PPP6R2O75170 966 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 OFD1O75665 1012 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 ITGB1P05556 798 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 PRPF4BQ13523 1007 aaKnown RBP27.67■■■□□ 2.02
LSM7-201ENST00000252622 BECN1Q14457 450 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 LONRF3Q496Y0 759 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 ATL3Q6DD88 541 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 TRIM6Q9C030 488 aaPredicted RBP27.67■■■□□ 2.02
LSM7-201ENST00000252622 RSAD1Q9HA92 442 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 UBN1Q9NPG3 1134 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 ARHGAP28Q9P2N2 729 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 TFIP11Q9UBB9 837 aaKnown RBP27.67■■■□□ 2.02
LSM7-201ENST00000252622 DAXXQ9UER7 740 aaPredicted RBP27.67■■■□□ 2.02
LSM7-201ENST00000252622 KCNG1Q9UIX4 513 aa27.67■■■□□ 2.02
LSM7-201ENST00000252622 CCDC169A6NNP5 214 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 N4BP3O15049 544 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 ARSHQ5FYA8 562 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 NOMO2Q5JPE7 1267 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 GPBP1Q86WP2 473 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.66■■■□□ 2.02
LSM7-201ENST00000252622 SLC17A8Q8NDX2 589 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 SPIRE2Q8WWL2 714 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 LARP4BQ92615 738 aaKnown RBP27.66■■■□□ 2.02
LSM7-201ENST00000252622 ALG13Q9NP73 1137 aaKnown RBP27.66■■■□□ 2.02
LSM7-201ENST00000252622 KMT5AQ9NQR1 393 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 STK17AQ9UEE5 414 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 ODF2LQ9ULJ1 636 aa27.66■■■□□ 2.02
LSM7-201ENST00000252622 RBM19Q9Y4C8 960 aaKnown RBP27.66■■■□□ 2.02
LSM7-201ENST00000252622 ITGA4P13612 1032 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 PLS3P13797 630 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 RAD51AP2Q09MP3 1159 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 MCM6Q14566 821 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 HACE1Q8IYU2 909 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 SPPL3Q8TCT6 385 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 URGCPQ8TCY9 931 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 ZNF558Q96NG5 402 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 NTPCRQ9BSD7 190 aaKnown RBP27.65■■■□□ 2.02
LSM7-201ENST00000252622 PDZD7Q9H5P4 517 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 TMEM134Q9H6X4 195 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 TBC1D13Q9NVG8 400 aa27.65■■■□□ 2.02
LSM7-201ENST00000252622 ZMYM2Q9UBW7 1377 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 TTLL13PA6NNM8 815 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 INPPL1O15357 1258 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 NPTXRO95502 500 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 BRD1O95696 1058 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 EDN1P05305 212 aa27.64■■■□□ 2.02
LSM7-201ENST00000252622 DDIT3P35638 169 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms