RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ZNF720Q7Z2F6 126 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 KAT2BQ92831 832 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 ZBTB10Q96DT7 871 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 OLFML3Q9NRN5 406 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 ARMCX3Q9UH62 379 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 SELPP16109 830 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 ATP4AP20648 1035 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 TRIM60Q495X7 471 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 CT47A1Q5JQC4 288 aaPredicted RBP12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 SLC39A5Q6ZMH5 540 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 C7orf61Q8IZ16 206 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 EEF2KMTQ96G04 330 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 METTL14Q9HCE5 456 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 CGNQ9P2M7 1197 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 ZNF233A6NK53 670 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 DLATP10515 647 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 MAPTP10636 758 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 PSMC2P35998 433 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 MORC3Q14149 939 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 GOLGA8IPA6NC78 632 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 GOLGA8JA6NMD2 632 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 STX10O60499 249 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 CLTBP09497 229 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 CA8P35219 290 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 XXYLT1Q8NBI6 393 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 PGBD4Q96DM1 585 aa12.16□□□□□ -0.46
TNFAIP3-201ENST00000237289 OFD1O75665 1012 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 TMEM191BP0C7N4 346 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 EN2P19622 333 aaPredicted RBP12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 KYAT1Q16773 422 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 RWDD2AQ9UIY3 292 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 AGO2Q9UKV8 859 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 UBE4BO95155 1302 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 PARNO95453 639 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 TNNC2P02585 160 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 KRT19P08727 400 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 SKIP12755 728 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 CAPSQ13938 189 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 USP38Q8NB14 1042 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 TRIM44Q96DX7 344 aaPredicted RBP12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 FGFR4P22455 802 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 SURF1Q15526 300 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 SPATA1Q5VX52 437 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 LRRC8DQ7L1W4 858 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 DOCK3Q8IZD9 2030 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 ABHD8Q96I13 439 aa12.15□□□□□ -0.46
TNFAIP3-201ENST00000237289 PDXKO00764 312 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 KIAA0391O15091 583 aaKnown RBP12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 NR3C1P04150 777 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 PTENP60484 403 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 CAP1Q01518 475 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 SESTD1Q86VW0 696 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 CDR2LQ86X02 465 aaPredicted RBP12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 DNAJC19Q96DA6 116 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 PRIMPOLQ96LW4 560 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 FAM213AQ9BRX8 229 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 ACKR2O00590 384 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 UPP2O95045 317 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 GPC3P51654 580 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 PCBP1Q15365 356 aaKnown RBP eCLIP12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 SH3RF1Q7Z6J0 888 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 PPFIBP1Q86W92 1011 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 XPNPEP1Q9NQW7 623 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 AXLP30530 894 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 ARL2P36404 184 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 WDR44Q5JSH3 913 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 URGCPQ8TCY9 931 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 CACTINQ8WUQ7 758 aaKnown RBP12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 ACAP3Q96P50 834 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 PDCL3Q9H2J4 239 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 NOLC1Q14978 699 aaKnown RBP eCLIP12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
TNFAIP3-201ENST00000237289 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 B4GALT4O60513 344 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 TOM1L1O75674 476 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 NPTXRO95502 500 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 STAG3L1P0CL83 205 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 UBASH3AP57075 661 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 SNRPFP62306 86 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 TFAMQ00059 246 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 IKBKEQ14164 716 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 TARBP2Q15633 366 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 DCAF4L1Q3SXM0 396 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 CACNA2D4Q7Z3S7 1137 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 CPB2Q96IY4 423 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 PCDHB7Q9Y5E2 793 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 ITGA4P13612 1032 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 DRP2Q13474 957 aa12.13□□□□□ -0.47
TNFAIP3-201ENST00000237289 SYCP1Q15431 976 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms