RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Wnk4Q80UE6 1222 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 4933409G03RikQ8C5U0 320 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Syne4Q8CII8 388 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Cd274Q9EP73 290 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Nfkbil1O88995 381 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Lin9Q8C735 542 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ogfrl1Q8VE52 464 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Sec13Q9D1M0 322 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rin2Q9D684 903 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tspan17Q9D7W4 270 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Aff4Q9ESC8 1160 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Mbd2Q9Z2E1 414 aa9.54□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Vamp4O70480 141 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ruvbl1P60122 456 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Thumpd3P97770 505 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Dab2ipQ3UHC7 1189 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Krt72Q6IME9 520 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Paxip1Q6NZQ4 1056 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Trim23Q8BGX0 574 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ak5Q920P5 562 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Hspa1bP17879 642 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 HmbsP22907 361 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 NrlP54846 237 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rrp1P56183 494 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Shcbp1lQ3TTP0 639 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Nek10Q3UGM2 1111 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Zkscan4Q5SZT6 480 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 MafkQ61827 156 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ovgp1Q62010 721 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pon2Q62086 354 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Map2k2Q63932 401 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Q8BL95 290 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Zc3h10Q8R205 435 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Snap47Q8R570 413 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Coro6Q920M5 471 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Adi1Q99JT9 179 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ranbp17Q99NF8 1088 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Stx11Q9D3G5 287 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Arl5bQ9D4P0 179 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Snapc4Q8BP86 1333 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 PrkchP23298 683 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Hoxd12P23812 268 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tbc1d10aP58802 500 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pja2Q80U04 707 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Oscp1Q8BHW2 379 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 4930504O13RikQ8C5Z9 145 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Nol6Q8R5K4 1152 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rnf125Q9D9R0 233 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Btbd35f21A0A140T8Q5 498 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Armt1A6H630 439 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Prr29B1ARI9 187 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ankrd65F6YK91 380 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rgs9O54828 675 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rplp2P99027 115 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Adck2Q6NSR3 617 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Naa35Q6PHQ8 725 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slain2Q8CI08 581 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Olfr1008Q8VGC7 313 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Sh3d19Q91X43 789 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Olfr1095A3KPP7 308 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pgbd1E9Q492 415 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rasgrf1P27671 1262 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Eps15l1Q60902 907 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Rassf6Q80UQ2 353 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Map4k5Q8BPM2 847 aaKnown RBP9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Slc13a4Q8BZ82 625 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 GhrlQ9EQX0 117 aa9.53□□□□□ -0.88
Clcn3-202ENSMUST00000056508 A0A1W2P799 418 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Zmynd8A2A484 1235 aaKnown RBP9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Mcf2A2AEU1 1111 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tmco2P0C1V4 183 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Xrcc5P27641 732 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Zbtb14Q08376 449 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ccdc138Q0VF22 680 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Nt5dc3Q3UHB1 546 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 PsapQ61207 557 aaKnown RBP9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 FntaQ61239 377 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Frs2Q8C180 508 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Pi4k2bQ8CBQ5 469 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tbc1d23Q8K0F1 684 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Unc5dQ8K1S2 956 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Hip1Q8VD75 1029 aaKnown RBP9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Necab2Q91ZP9 389 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ppp4r3bQ922R5 820 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tcam1Q99NB3 548 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Naa16Q9DBB4 864 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Telo2Q9DC40 840 aaKnown RBP9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Tmod4Q9JLH8 345 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Ror2Q9Z138 944 aa9.52□□□□□ -0.88
Clcn3-202ENSMUST00000056508 Prl3d3A0A0M6L0J6 224 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm12666A2AMD0 254 aaKnown RBP9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Exoc6bA6H5Z3 810 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Prl3d2F6R3P9 224 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cyp4f40G3UW81 524 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Stx2Q00262 289 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Caprin1Q60865 707 aaKnown RBP9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Vav2Q60992 868 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Eif2aQ8BJW6 581 aaKnown RBP9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nkiras1Q8CEC5 192 aa9.52□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Tcp11l2Q8K1H7 517 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms