RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 1700001K19RikQ80ZT1 219 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ankfy1Q810B6 1169 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Traf3ip3Q8C0G2 513 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 SucoQ8C341 1250 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Vps52Q8C754 723 aaKnown RBP9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Kcnk13Q8R1P5 405 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Hspbp1Q99P31 357 aaKnown RBP9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Atp6ap2Q9CYN9 350 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 B4galt5Q9JMK0 388 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Itga2bQ9QUM0 1033 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Sorbs3Q9R1Z8 733 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Msl3Q9WVG9 525 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Scgb2b18A0A087WPA9 112 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cspp1B2RX88 1205 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cavin1O54724 392 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 SlkO54988 1233 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Prl2c3P04768 224 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mmp3P28862 477 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 FpgsP48760 587 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ddx10Q80Y44 875 aaKnown RBP9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Rasal3Q8C2K5 1041 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Slc15a2Q9ES07 729 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 PalmdQ9JHU2 551 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cnpy2Q9QXT0 182 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Syt10Q9R0N4 523 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Map2k5Q9WVS7 448 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mettl1Q9Z120 268 aa9.68□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Zfr2E9Q5M4 874 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Pdrg1P59048 133 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Arf4P61750 180 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Fam198aQ3UY90 562 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cdc37Q61081 379 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mapk15Q80Y86 549 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Prr11Q8BHE0 368 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Qsox1Q8BND5 748 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ccdc169Q8BXX9 214 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ccser1Q8C0C4 895 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ccdc15Q8C9M2 810 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Fam160b1Q8CDM8 764 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Pym1Q8CHP5 203 aaKnown RBP9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Adgrg2Q8CJ12 1009 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Lpin2Q99PI5 893 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Castor1Q9CWQ8 331 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Xpo4Q9ESJ0 1151 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 PigoQ9JJI6 1093 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Rcan3Q9JKK0 239 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tbkbp1A2A9T0 611 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm13941A2AJ38 245 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ldlrad1D3YYZ1 218 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gimap9G3X987 291 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cct6aP80317 531 aaKnown RBP9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ano7Q14AT5 859 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Olfr121Q5CZY0 321 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Esyt3Q5DTI8 891 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ago2Q8CJG0 860 aaKnown RBP9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ablim1Q8K4G5 861 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ankef1Q9D2J7 775 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ccdc89Q9DA73 370 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Dusp6Q9DBB1 381 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tlr5Q9JLF7 859 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Foxe3Q9QY14 288 aa9.67□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Igkv10-96A0A140T8M1 115 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cdr2lA2A6T1 465 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 2610008E11RikG3X964 669 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tnfrsf11aO35305 625 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Fzd1O70421 642 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Dlg3P70175 849 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gabpb2P81069 414 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Echdc2Q3TLP5 296 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Srebf2Q3U1N2 1130 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Zbtb8osQ505B7 168 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Q8BGN9 141 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Kcnv1Q8BZN2 503 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Klhl30Q8C3F7 581 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tdrd7Q8K1H1 1086 aaKnown RBP9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Sbk1Q8QZX0 417 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Sgms1Q8VCQ6 419 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Akirin1Q99LF1 191 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cfap53Q9D439 514 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 PrameQ9D4Z5 464 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Sdr42e1Q9D665 394 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Igdcc4Q9EQS9 1252 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ttc3O88196 1979 aaKnown RBP9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Pds5aQ6A026 1332 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Map7d2A2AG50 781 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Gm973E9Q295 1059 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Pip4k2aO70172 405 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tbx3P70324 741 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ccdc33Q3ULW6 985 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Syce2Q505B8 171 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Atp13a4Q5XF90 1193 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Kiaa1328Q6NZK5 612 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Znf507Q6ZPY5 941 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Zc3h6Q8BYK8 1177 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ano2Q8CFW1 1002 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Zfp64Q99KE8 643 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Med10Q9CXU0 135 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Capn10Q9ESK3 666 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Copb1Q9JIF7 953 aa9.66□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Supt3B0QZW4 406 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms