RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Depdc1bQ8BH88 529 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Krt222Q8CCX5 294 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Cbwd1Q8VEH6 393 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mis12Q9CY25 206 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Cfap53Q9D439 514 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rabl3Q9D4V7 236 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 1700016D06RikQ9DAA5 166 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Kcnq4Q9JK97 696 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Kcnq2Q9Z351 759 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm28036V9GXJ1 658 aa9.14□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Olfr552E9Q545 317 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm3127E9Q9P5 263 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm8909G3UXE9 396 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm3453K7N724 263 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Zfpm1O35615 995 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gjb1P28230 283 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tff2Q03404 129 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Nhej1Q3KNJ2 295 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Slc10a4Q3UEZ8 437 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Hdhd2Q3UGR5 259 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Lrrc14bQ3UJB3 510 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm5935Q497S0 212 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Znf652Q5DU09 608 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 OgdhQ60597 1023 aaKnown RBP9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tor4aQ8BH02 426 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Usp20Q8C6M1 916 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Pym1Q8CHP5 203 aaKnown RBP9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tbx22Q8K402 517 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Senp2Q91ZX6 588 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Nxnl2Q9D531 156 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tmx2Q9D710 295 aaKnown RBP9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 MesdQ9ERE7 224 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Limd1Q9QXD8 668 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 RptorQ8K4Q0 1335 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Abcb11Q9QY30 1321 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Fam71aB7XG49 585 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Wdr72D3YYM4 1114 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Pja1O55176 578 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 SfnO70456 248 aaKnown RBP9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Mucl2P02815 138 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Zbtb17Q60821 794 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 HarsQ61035 509 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Zfp943Q6NZP4 507 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Map1sQ8C052 973 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Epn2Q8CHU3 595 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Cpa5Q8R4H4 436 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 IrgqQ8VIM9 583 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Vta1Q9CR26 309 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rnf225Q9D7D1 332 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rbp7Q9EPC5 134 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 FibpQ9JI19 357 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Sv2aQ9JIS5 742 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Olig1Q9JKN5 260 aa9.13□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Fam129cD3YZB0 591 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Clca3bE9PUL3 1044 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ccdc24E9PUW8 296 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rps6ka1P18653 724 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Hoxc10P31257 342 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Sh3bp1P55194 680 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Zhx1P70121 873 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Znf219Q6IQX8 726 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Dzip3Q7TPV2 1204 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ints8Q80V86 995 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Lrrc4cQ8C031 640 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 BbxQ8VBW5 907 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Med15Q924H2 789 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ggps1Q9WTN0 300 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Orc1Q9Z1N2 840 aaKnown RBP9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 AfmO89020 608 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rrm1P07742 792 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Rnpc3Q3UZ01 514 aaKnown RBP9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Klra5Q60652 266 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 E2f5Q61502 335 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Pla2g4cQ64GA5 597 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Jade3Q6IE82 823 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ppp2r5aQ6PD03 486 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Dcaf15Q6PFH3 600 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Kcnk18Q6VV64 394 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 LarsQ8BMJ2 1178 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tcaf1Q8BNE1 924 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Neto2Q8BNJ6 525 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Slc26a6Q8CIW6 758 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Spata2Q8K004 515 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Bcs1lQ9CZP5 418 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Trmt10bQ9D075 318 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Grtp1Q9D3N8 359 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Cntn6Q9JMB8 1028 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm8994E9PV04 411 aaKnown RBP9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Dnajc21E9Q8D0 531 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Akr1b10G5E895 316 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tcp1P11983 556 aaKnown RBP9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 4930502E18RikQ14BQ3 236 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Palb2Q3U0P1 1104 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Gm10392Q3V3I3 114 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Sin3bQ62141 1098 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Cfap100Q80VN0 613 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Usp27Q8CEG8 438 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Sulf1Q8K007 870 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Tldc1Q8K0P3 455 aa9.12□□□□□ -0.95
Ptchd1-201ENSMUST00000038665 Ctu1Q99J10 420 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms