RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Nmrk1Q91W63 195 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gnrh1P13562 90 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Erbb2P70424 1256 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rbm46P86049 533 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 ItkQ03526 625 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Sh3tc2Q80VA5 1289 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mageb18Q8BQR7 327 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rfx6Q8C7R7 927 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gpc5Q8CAL5 572 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Champ1Q8K327 802 aaKnown RBP10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 AticQ9CWJ9 592 aaKnown RBP10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Aldh18a1Q9Z110 795 aa10.97□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gm10134F6ZQC6 126 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Pth1rP41593 591 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tatdn3Q3U1C6 294 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Kdm7aQ3UWM4 940 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ccdc154Q6RUT8 657 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Raver2Q7TPD6 673 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gm5622Q810Q0 167 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 PolrmtQ8BKF1 1207 aaKnown RBP10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Wdr35Q8BND3 1181 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Trmt2aQ8BNV1 574 aaKnown RBP10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Usp38Q8BW70 1042 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Uba6Q8C7R4 1053 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gbp5Q8CFB4 590 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Abcg3Q99P81 650 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 PpihQ9D868 188 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Git2Q9JLQ2 708 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Rnf4Q9QZS2 194 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Gm13084A2A8N0 494 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Cyth3O08967 399 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Akr1b1P45376 316 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Nkx2-3P97334 362 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Ripply1Q2WG77 201 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 InscQ3HNM7 579 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Sult1d1Q3UZZ6 295 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Dsg1aQ61495 1057 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Mysm1Q69Z66 819 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Znf579Q80VM4 562 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Tcp10aQ80W76 438 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Pum3Q8BKS9 647 aaKnown RBP10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 EmsyQ8BMB0 1264 aaKnown RBP10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 C3P01027 1663 aa10.96□□□□□ -0.65
Ccdc40-201ENSMUST00000035935 Abcb11Q9QY30 1321 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Scgb2b18A0A087WPA9 112 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ifnl2Q4VK74 193 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Acbd5Q5XG73 508 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mrps31Q61733 384 aaKnown RBP10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 TwistnbQ78WZ7 330 aaKnown RBP10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gbp9Q8BTS3 619 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gmcl1Q920G9 524 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Adrm1Q9JKV1 407 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 BcamQ9R069 622 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Serpinb3aG3X9V8 387 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mucl2P02815 138 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gpc4P51655 557 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Psmc1P62192 440 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Klra9Q2TJJ8 266 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Clca4aQ6Q473 924 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Glis3Q6XP49 780 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Adcy2Q80TL1 1090 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zc3h6Q8BYK8 1177 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Atxn7Q8R4I1 867 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Nr3c2Q8VII8 978 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Prpsap1Q9D0M1 356 aa10.96□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm28043E0CXC2 719 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 VdrP48281 422 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Capn13Q3UW68 665 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tbx2Q60707 711 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Papd5Q68ED3 633 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Znf219Q6IQX8 726 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ush1gQ80T11 461 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 UvragQ8K245 698 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mtss1Q8R1S4 759 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gps1Q99LD4 471 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Inpp4aQ9EPW0 939 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rtn3Q9ES97 964 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ugt1a8D3Z748 530 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ugt1a10E9PXN7 530 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 EsrraO08580 422 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Spag6Q3V0U9 509 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cage1Q5IR70 849 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Atl2Q6PA06 583 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Best2Q8BGM5 508 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 MymkQ9D1N4 221 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Osbpl7A2A716 963 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Lrriq4A6H6A4 596 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Arhgap42B2RQE8 841 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zfp850J3QPC5 689 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 RnaselQ05921 735 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 D630036H23RikQ3UQD6 204 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 UrgcpQ5NCI0 926 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ptpn14Q62130 1189 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Dlg1Q811D0 905 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mrgprx1Q8CIP3 322 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gtf2ird1Q9JI57 1104 aaKnown RBP10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 D830030K20RikE9PYQ5 218 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm3043K7N693 218 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm16440K7N6G6 218 aa10.95□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm2244L7N2A3 218 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms