RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Actl9Q8CG27 415 aa11.4□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Rbm41Q8JZV4 413 aa11.4□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Xrcc4Q924T3 326 aa11.4□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cnot8Q9D8X5 292 aa11.4□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cul3Q9JLV5 768 aa11.4□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tob2Q9JM55 345 aa11.4□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm36210A0A1B0GS00 229 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm29133A0A1B0GT72 266 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 1700024B05RikE9Q6D7 167 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 R3hdm1E9Q9Q2 1135 aaKnown RBP11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Calb1P12658 261 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Creb1Q01147 341 aaKnown RBP11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Drp2Q05AA6 957 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Trim75Q3UWZ0 467 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 LrmpQ60664 539 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cracr2bQ80ZJ8 394 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ccdc15Q8C9M2 810 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ssx2ipQ8VC66 615 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Cbwd1Q8VEH6 393 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Caskin2Q8VHK1 1201 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 CbsQ91WT9 561 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Jph2Q9ET78 696 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Abhd2Q9QXM0 425 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Atp6v1g2Q9WTT4 118 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Herc3A6H6S0 1050 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ccnyl1D3YUJ3 367 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Fam129cD3YZB0 591 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Vmn2r79E9Q067 851 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Taf4E9QAP7 1042 aaKnown RBP11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ankrd13dQ6PD24 605 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ube3cQ80U95 1083 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ints2Q80UK8 1198 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Catsper3Q80W99 395 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Eif2b5Q8CHW4 717 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mospd1Q8VEL0 213 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Afg3l1Q920A7 789 aaKnown RBP11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 NenfQ9CQ45 171 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ifrd2Q9D8U0 441 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Orc3Q9JK30 715 aaKnown RBP11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Flot1O08917 428 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Rasgrf1P27671 1262 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 DesP31001 469 aaKnown RBP11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 NsfP46460 744 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Wdr41Q3UDP0 460 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 P4ha1Q60715 534 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 PapolaQ61183 739 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Sec24bQ80ZX0 1251 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Srp68Q8BMA6 625 aaKnown RBP11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Neto2Q8BNJ6 525 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Clip4Q8CI96 704 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Wars2Q9CYK1 360 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Lrrc34Q9DAM1 415 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Rps6ka4Q9Z2B9 773 aa11.39□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Col4a1P02463 1669 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Exoc7O35250 697 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Zfy1P10925 782 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Acsbg2Q2XU92 667 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Esyt2Q3TZZ7 845 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ccdc84Q4VA36 332 aaKnown RBP11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm14685Q52KH6 695 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Slc38a10Q5I012 1090 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 CapslQ6P8Y1 208 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Pagr1aQ99L02 253 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 RnmtQ9D0L8 465 aaKnown RBP11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mrpl12Q9DB15 201 aaKnown RBP11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tjp2Q9Z0U1 1167 aaKnown RBP11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ulk4Q3V129 1303 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Sema6bO54951 886 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tp53P02340 387 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Map3k9Q3U1V8 1077 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Atp4aQ64436 1033 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 N4bp1Q6A037 893 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 TbataQ7TSD4 393 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ttc39bQ8BYY4 617 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ube2q2Q8K2Z8 378 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tceal1Q921P9 165 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Dach2Q925Q8 634 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Abtb1Q99LJ2 478 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Mphosph6Q9D1Q1 161 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Chmp2aQ9DB34 222 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Uchl3Q9JKB1 230 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Prl2c5Q9JLV9 222 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 PapolbQ9WVP6 641 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gm45208A0A140LJ36 292 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Serpina3iD3Z450 408 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Serpina16D3Z660 418 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 GfapP03995 430 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tsta3P23591 321 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Klra5Q60652 266 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Hif1aQ61221 836 aaKnown RBP11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Adam6bQ6IMH7 756 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Tmem132dQ76HP3 1097 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 IntS13Q8QZV7 732 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Vmn1r218Q8R261 298 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Trpm8Q8R4D5 1104 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 MypopQ8R4U1 393 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Ppp1r16bQ8VHQ3 568 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Gpr108Q91WD0 569 aa11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Bzw1Q9CQC6 419 aaKnown RBP11.38□□□□□ -0.59
Rnf40-201ENSMUST00000033088 Dydc2Q9D3X8 139 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms