RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Adam22Q9R1V6 904 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Pacsin2Q9WVE8 486 aaKnown RBP8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ep400Q8CHI8 3072 aaKnown RBP8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gm4985A2ALC6 410 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gm8909G3UXE9 396 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gm3415J3QMS8 315 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ap1m1P35585 423 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 PrkcbP68404 671 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Muc3aQ3U5A2 218 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Znf354cQ571J5 560 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 NntQ61941 1086 aaKnown RBP8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Zfp90Q61967 636 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Msantd2Q6NZR2 559 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Nacc1Q7TSZ8 514 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tmem117Q8BH18 514 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Sun2Q8BJS4 731 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Olfr395Q8VGR3 312 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Adgrf4Q9D2L6 698 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gm3404Q9D506 307 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Cse1lQ9ERK4 971 aaKnown RBP8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Sv2aQ9JIS5 742 aa8.44□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ccr1P51675 355 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Anp32eP97822 260 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ly9Q01965 654 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Sema5bQ60519 1093 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Pde1cQ64338 706 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Mysm1Q69Z66 819 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 NostrinQ6WKZ7 506 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ccdc25Q78PG9 208 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 PolrmtQ8BKF1 1207 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tada3Q8R0L9 432 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Castor1Q9CWQ8 331 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Zfyve19Q9DAZ9 389 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Pdzd4Q9QY39 772 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Plod3Q9R0E1 741 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Mtmr7Q9Z2C9 660 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gm21973F6WEZ7 68 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Rgs22G3UYX5 1258 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Krt13P08730 437 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Lamp1P11438 406 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Art2aP17981 287 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Pola2P33611 600 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Fmr1P35922 614 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Cetn1P41209 172 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tfdp1Q08639 410 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Skap2Q3UND0 358 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Klra6Q60653 266 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tcaf3Q6QR59 914 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Entpd3Q8BFW6 529 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Zdhhc15Q8BGJ0 337 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Drd5Q8BLD9 478 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 LarsQ8BMJ2 1178 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Dpp9Q8BVG4 862 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 ClasrpQ8CFC7 668 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 StrcQ8VIM6 1809 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ddx41Q91VN6 622 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Rpn1Q91YQ5 608 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ctu1Q99J10 420 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Rtfdc1Q99K95 307 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tsnaxip1Q99P25 704 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Smco2Q9DA21 347 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Prl2b1Q9DAZ2 228 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 IdeQ9JHR7 1019 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Rpf2Q9JJ80 306 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Polr2aP08775 1970 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tldc2A2ACG1 198 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Map7d2A2AG50 781 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Vmn2r87E9PZX4 848 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gm1661E9Q963 441 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Magea4F2Z493 315 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Nr1i3O35627 358 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ndufs6P52503 116 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Specc1Q5SXY1 1067 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Lrrn2Q6PHP6 730 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Spag7Q7TNE3 227 aaKnown RBP8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Cdkn2aipQ8BI72 563 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Chn1Q91V57 459 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 BrdtQ91Y44 956 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Zfp64Q99KE8 643 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tas1r1Q99PG6 842 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Rnf6Q9DBU5 667 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Uchl3Q9JKB1 230 aa8.43□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gcnt4E9Q649 455 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 SarsP26638 512 aaKnown RBP8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 VegfaQ00731 214 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Dsg1aQ61495 1057 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Ecm1Q61508 559 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Skiv2lQ6NZR5 1244 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Cfap100Q80VN0 613 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tmem161bQ8C2L6 487 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Eif2ak3Q9Z2B5 1114 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Plxnb2B2RXS4 1842 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Pgap3A2A559 320 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gm4297D3YWB7 211 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Zfpm1O35615 995 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Dync1i1O88485 628 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Slc3a2P10852 526 aaKnown RBP8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Tcp1P11983 556 aaKnown RBP8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Gtf2bP62915 316 aa8.42□□□□□ -1.06
Ccdc39-201ENSMUST00000029222 Mphosph8Q3TYA6 858 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms