RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Spdl1Q923A2 608 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Mrpl11Q9CQF0 192 aaKnown RBP19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Fam133bQ9CVI2 245 aaKnown RBP19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Cyp2s1Q9DBX6 501 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Usp29Q9ES63 869 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Grk1Q9WVL4 564 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Sned1Q70E20 1403 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Lamb2Q61292 1799 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Map2k1P31938 393 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ercc5P35689 1170 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ranbp17Q99NF8 1088 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Hspbp1Q99P31 357 aaKnown RBP19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 IscuQ9D7P6 168 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Tcirg1Q9JHF5 834 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Cnga3Q9JJZ8 631 aa19.82■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Syt2P46097 422 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Psmd1Q3TXS7 953 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 SpdyaQ5IBH7 310 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 EsrrbQ61539 433 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 RpainQ9CWY9 219 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Gpihbp1Q9D1N2 228 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Wnt7bP28047 349 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 NppbP40753 121 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Npr3P70180 536 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Tex35Q14BK3 207 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 HnrnpdQ60668 355 aaKnown RBP19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Epc2Q8C0I4 808 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Fam20aQ8CID3 541 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Slc12a8Q8VI23 705 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ttc5Q99LG4 440 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Mis12Q9CY25 206 aa19.81■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Calb1P12658 261 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 AdssP46664 456 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Adcy7P51829 1099 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Cyp11b1Q3TG86 501 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ccdc92bQ5SUE3 299 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Gprasp2Q8BUY8 826 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Kcnv2Q8CFS6 562 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Slc26a6Q8CIW6 758 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 MyripQ8K3I4 856 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Sppl3Q9CUS9 384 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Taf1Q80UV9 1891 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Hsf3D0VYS2 492 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Sorbs1Q62417 1290 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Efcab14Q8BGQ6 484 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ppfia2Q8BSS9 1257 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Sdr42e1Q9D665 394 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Rasgrp1Q9Z1S3 795 aa19.8■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Itgb5O70309 798 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Chmp6P0C0A3 200 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ccdc33Q3ULW6 985 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 StilQ60988 1262 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Six1Q62231 284 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Cnot10Q8BH15 744 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ly75Q60767 1723 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ppp1r9aH3BJD6 1292 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Atp9aO70228 1047 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Pdk4O70571 412 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Tex11Q14AT2 947 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Prom2Q3UUY6 835 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 AlcamQ61490 583 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Dusp4Q8BFV3 398 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Nudt12Q9DCN1 462 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Krt71Q9R0H5 524 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ttll6A4Q9E8 822 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Abl2Q4JIM5 1182 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ppp1r13bQ62415 1087 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Atg4cQ811C2 458 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Sap130Q8BIH0 1057 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Cgref1Q8R1U2 281 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Themis2Q91YX0 663 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 PigoQ9JJI6 1093 aa19.79■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Myo5aQ99104 1853 aaKnown RBP19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Fam205a1D3YZF6 1314 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 IvlP48997 467 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Frmd8Q3UFK8 466 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Lin9Q8C735 542 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Calhm6Q8C9E8 313 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Fbxo43Q8CDI2 640 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 SfpqQ8VIJ6 699 aaKnown RBP19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Lman1Q9D0F3 517 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Irx5Q9JKQ4 484 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Cntnap5cQ0V8T7 1305 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ddx49Q4FZF3 480 aaKnown RBP19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ctnna2Q61301 953 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ints8Q80V86 995 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Slc9a9Q8BZ00 644 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Kiaa0391Q8JZY4 584 aaKnown RBP19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Adam22Q9R1V6 904 aa19.78■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Znf804aA2AKY4 1200 aa19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Creb1Q01147 341 aaKnown RBP19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Miga1Q4QQM5 600 aa19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ythdf3Q8BYK6 585 aaKnown RBP19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Defb15Q8R2I5 79 aa19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Mettl16Q9CQG2 553 aaKnown RBP19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Cfap53Q9D439 514 aa19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 MycbpQ9EQS3 103 aa19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Ddx20Q9JJY4 825 aaKnown RBP19.77■□□□□ 0.76
Ccdc3-201ENSMUST00000027988 Gm4297D3YWB7 211 aa19.77■□□□□ 0.75
Ccdc3-201ENSMUST00000027988 Serpina1aP07758 413 aa19.77■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms